RNA–Protein interactions for RNA: ENST00000600031.1

VRK3-218, Transcript of vaccinia related kinase 3, humanhuman

Gene VRK3, Length 2,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-218ENST00000600031 RBPJLQ9UBG7 517 aa17.06■□□□□ 0.32
VRK3-218ENST00000600031 CETPP11597 493 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 EIF2AK2P19525 551 aaKnown RBP17.05■□□□□ 0.32
VRK3-218ENST00000600031 NAALADL2Q58DX5 795 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 RRAGBQ5VZM2 374 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 KANK3Q6NY19 840 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 SARM1Q6SZW1 724 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 CCDC186Q7Z3E2 898 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 RMDN3Q96TC7 470 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 NUDT12Q9BQG2 462 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 PYM1Q9BRP8 204 aaKnown RBP17.05■□□□□ 0.32
VRK3-218ENST00000600031 PXMP2Q9NR77 195 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 TUBE1Q9UJT0 475 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 RABGAP1Q9Y3P9 1069 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 CCL15-CCL14A0A0B4J2E2 113 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 GOLGA6L19H0YKK7 550 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 STAT6P42226 847 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 AFMP43652 599 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 HUNKP57058 714 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 STX1AQ16623 288 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 CCL15Q16663 113 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 CHST13Q8NET6 341 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 RASSF8Q8NHQ8 419 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 STAMQ92783 540 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 FAM20AQ96MK3 541 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 MTRQ99707 1265 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 HOOK1Q9UJC3 728 aaKnown RBP17.05■□□□□ 0.32
VRK3-218ENST00000600031 PCDHA5Q9Y5H7 936 aa17.05■□□□□ 0.32
VRK3-218ENST00000600031 BTBD19C9JJ37 291 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 MEIS1O00470 390 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 BIN1O00499 593 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 CYP2C8P10632 490 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 ITGB5P18084 799 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 MRPS9P82933 396 aaKnown RBP17.04■□□□□ 0.32
VRK3-218ENST00000600031 PGM5Q15124 567 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 PCNX4Q63HM2 1172 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 MXRA8Q9BRK3 442 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 MOV10L1Q9BXT6 1211 aaKnown RBP17.04■□□□□ 0.32
VRK3-218ENST00000600031 R3HDMLQ9H3Y0 253 aa17.04■□□□□ 0.32
VRK3-218ENST00000600031 ZBTB48P10074 688 aaPredicted RBP17.03■□□□□ 0.32
VRK3-218ENST00000600031 ARP10275 920 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 PLCG1P19174 1290 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 CASP1P29466 404 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 SPIRE1Q08AE8 756 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 Q3C1V9 767 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 ARHGEF16Q5VV41 709 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 PDCD2LQ9BRP1 358 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 PDHXO00330 501 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 GRB10Q13322 594 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 IQCB1Q15051 598 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 ISM2Q6H9L7 571 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 NCAPG2Q86XI2 1143 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 SNX29Q8TEQ0 813 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 PNMA5Q96PV4 448 aa17.03■□□□□ 0.32
VRK3-218ENST00000600031 GPBP1L1Q9HC44 474 aaPredicted RBP17.03■□□□□ 0.32
VRK3-218ENST00000600031 KRT79Q5XKE5 535 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 C11orf57Q6ZUT1 292 aaPredicted RBP17.02■□□□□ 0.32
VRK3-218ENST00000600031 CCDC34Q96HJ3 373 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 WDR11Q9BZH6 1224 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 VAV3Q9UKW4 847 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 PNMA3Q9UL41 463 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 UBIAD1Q9Y5Z9 338 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 PASKQ96RG2 1323 aa17.02■□□□□ 0.32
VRK3-218ENST00000600031 MYCLP12524 364 aaPredicted RBP17.02■□□□□ 0.31
VRK3-218ENST00000600031 SARSP49591 514 aaKnown RBP17.02■□□□□ 0.31
VRK3-218ENST00000600031 SETQ01105 290 aaPredicted RBP17.02■□□□□ 0.31
VRK3-218ENST00000600031 ECM1Q16610 540 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 ANKRD35Q8N283 1001 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 SLC5A5Q92911 643 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 CALML4Q96GE6 196 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 MRFAP1L1Q96HT8 127 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 PTPN18Q99952 460 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 MAF1Q9H063 256 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 ANO10Q9NW15 660 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 FBXO40Q9UH90 709 aa17.02■□□□□ 0.31
VRK3-218ENST00000600031 LCTP09848 1927 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 ERCC3P19447 782 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 DPYDQ12882 1025 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 DPCR1Q3MIW9 517 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 NT5DC1Q5TFE4 455 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 ANKRD23Q86SG2 305 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 SPATA20Q8TB22 786 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 SLC45A1Q9Y2W3 748 aa17.01■□□□□ 0.31
VRK3-218ENST00000600031 KIF3CO14782 793 aa17■□□□□ 0.31
VRK3-218ENST00000600031 PSMD10O75832 226 aa17■□□□□ 0.31
VRK3-218ENST00000600031 NLRP12P59046 1061 aa17■□□□□ 0.31
VRK3-218ENST00000600031 NCAPH2Q6IBW4 605 aa17■□□□□ 0.31
VRK3-218ENST00000600031 NIPA1Q7RTP0 329 aa17■□□□□ 0.31
VRK3-218ENST00000600031 SAPCD2Q86UD0 394 aa17■□□□□ 0.31
VRK3-218ENST00000600031 RASAL3Q86YV0 1011 aa17■□□□□ 0.31
VRK3-218ENST00000600031 NSUN6Q8TEA1 469 aaKnown RBP17■□□□□ 0.31
VRK3-218ENST00000600031 SMARCE1Q969G3 411 aa17■□□□□ 0.31
VRK3-218ENST00000600031 ZNF577Q9BSK1 485 aa17■□□□□ 0.31
VRK3-218ENST00000600031 BLZF1Q9H2G9 400 aa17■□□□□ 0.31
VRK3-218ENST00000600031 JADE2Q9NQC1 790 aa17■□□□□ 0.31
VRK3-218ENST00000600031 MAN1B1Q9UKM7 699 aa17■□□□□ 0.31
VRK3-218ENST00000600031 SLC25A27O95847 323 aa17■□□□□ 0.31
VRK3-218ENST00000600031 NR3C2P08235 984 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms