RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 SCRN1Q12765 414 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 CELF3Q5SZQ8 465 aaKnown RBP32.27■■■□□ 2.76
SSBP4-206ENST00000599699 SH3RF1Q7Z6J0 888 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 EMID1Q96A84 441 aaPredicted RBP32.27■■■□□ 2.76
SSBP4-206ENST00000599699 MLXIPQ9HAP2 919 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 TMEM39AQ9NV64 488 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 TMEM260Q9NX78 707 aa32.27■■■□□ 2.76
SSBP4-206ENST00000599699 SPATA31C2B4DYI2 1134 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 TLR3O15455 904 aaKnown RBP32.26■■■□□ 2.75
SSBP4-206ENST00000599699 PFKFB2O60825 505 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 CDKL5O76039 1030 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 CHMP4BP1P59074 171 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 CCDC148Q8NFR7 591 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 SPATA33Q96N06 139 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 ANO3Q9BYT9 981 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 ZMYND12Q9H0C1 365 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 VPS54Q9P1Q0 977 aa32.26■■■□□ 2.75
SSBP4-206ENST00000599699 ESYT2A0FGR8 921 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 GNA11P29992 359 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 ICAM3P32942 547 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 FAAP100Q0VG06 881 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 AP3B2Q13367 1082 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 DGKDQ16760 1214 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 MYSM1Q5VVJ2 828 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 JAKMIP3Q5VZ66 844 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 PPTC7Q8NI37 304 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 C22orf23Q9BZE7 217 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 GRIN2DO15399 1336 aa32.25■■■□□ 2.75
SSBP4-206ENST00000599699 TRIM43BA6NCK2 446 aa32.24■■■□□ 2.75
SSBP4-206ENST00000599699 DEXIO95424 95 aa32.24■■■□□ 2.75
SSBP4-206ENST00000599699 SLC43A3Q8NBI5 491 aa32.24■■■□□ 2.75
SSBP4-206ENST00000599699 TRIM43Q96BQ3 446 aaPredicted RBP32.24■■■□□ 2.75
SSBP4-206ENST00000599699 GDF15Q99988 308 aa32.24■■■□□ 2.75
SSBP4-206ENST00000599699 SEZ6LQ9BYH1 1024 aa32.24■■■□□ 2.75
SSBP4-206ENST00000599699 NEDD9Q14511 834 aa32.23■■■□□ 2.75
SSBP4-206ENST00000599699 REXO1Q8N1G1 1221 aaKnown RBP32.23■■■□□ 2.75
SSBP4-206ENST00000599699 BICD2Q8TD16 824 aa32.23■■■□□ 2.75
SSBP4-206ENST00000599699 CLK2P49760 499 aaKnown RBP32.22■■■□□ 2.75
SSBP4-206ENST00000599699 SEMA3FQ13275 785 aa32.22■■■□□ 2.75
SSBP4-206ENST00000599699 FAM47CQ5HY64 1035 aa32.22■■■□□ 2.75
SSBP4-206ENST00000599699 FAM126BQ8IXS8 530 aa32.22■■■□□ 2.75
SSBP4-206ENST00000599699 GPRASP2Q96D09 838 aa32.22■■■□□ 2.75
SSBP4-206ENST00000599699 CDHR1Q96JP9 859 aa32.22■■■□□ 2.75
SSBP4-206ENST00000599699 UBE2OQ9C0C9 1292 aaKnown RBP32.22■■■□□ 2.75
SSBP4-206ENST00000599699 UPF2Q9HAU5 1272 aaKnown RBP32.22■■■□□ 2.75
SSBP4-206ENST00000599699 SH3GLB2Q9NR46 395 aa32.22■■■□□ 2.75
SSBP4-206ENST00000599699 RAG1P15918 1043 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 ITGB5P18084 799 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 NLRP5P59047 1200 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 MTMR1Q13613 665 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 NBPF20Q3BBV1 942 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 HABP4Q5JVS0 413 aaKnown RBP32.21■■■□□ 2.75
SSBP4-206ENST00000599699 MCTP2Q6DN12 878 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 CYFIP1Q7L576 1253 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 NECAB1Q8N987 351 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 UBIAD1Q9Y5Z9 338 aa32.21■■■□□ 2.75
SSBP4-206ENST00000599699 NOP56O00567 594 aaKnown RBP32.2■■■□□ 2.75
SSBP4-206ENST00000599699 KIAA0355O15063 1070 aa32.2■■■□□ 2.75
SSBP4-206ENST00000599699 ME3Q16798 604 aa32.2■■■□□ 2.75
SSBP4-206ENST00000599699 HSDL1Q3SXM5 330 aa32.2■■■□□ 2.75
SSBP4-206ENST00000599699 BCAS3Q9H6U6 928 aa32.2■■■□□ 2.75
SSBP4-206ENST00000599699 ZNF76P36508 570 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 SREBF1P36956 1147 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 PPP1R13LQ8WUF5 828 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 BADQ92934 168 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 TRPV6Q9H1D0 765 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 PRO3102Q9H379 93 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 JADE2Q9NQC1 790 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 PKD2L1Q9P0L9 805 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 GTF3C3Q9Y5Q9 886 aa32.19■■■□□ 2.74
SSBP4-206ENST00000599699 ADAMTS3O15072 1205 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 PPFIA4O75335 1185 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 ZNF286BP0CG31 522 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 BMP8BP34820 402 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 METTL7BQ6UX53 244 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 GIMAP8Q8ND71 665 aaPredicted RBP32.18■■■□□ 2.74
SSBP4-206ENST00000599699 SENP7Q9BQF6 1050 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 MXRA8Q9BRK3 442 aa32.18■■■□□ 2.74
SSBP4-206ENST00000599699 LARGE1O95461 756 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 CD4P01730 458 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 ARHGAP4P98171 946 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 SP4Q02446 784 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 NFRKBQ6P4R8 1299 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 RASGRP4Q8TDF6 673 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 GTF3C6Q969F1 213 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 AIFM3Q96NN9 605 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 TBX21Q9UL17 535 aa32.17■■■□□ 2.74
SSBP4-206ENST00000599699 B4GALT4O60513 344 aa32.16■■■□□ 2.74
SSBP4-206ENST00000599699 DTNBO60941 627 aa32.16■■■□□ 2.74
SSBP4-206ENST00000599699 KATNAL1Q9BW62 490 aa32.16■■■□□ 2.74
SSBP4-206ENST00000599699 MAFGO15525 162 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 ATP9AO75110 1047 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 ITGB8P26012 769 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 RBM25P49756 843 aaKnown RBP32.15■■■□□ 2.74
SSBP4-206ENST00000599699 CEP55Q53EZ4 464 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 CYP2W1Q8TAV3 490 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 KAT2BQ92831 832 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 ALG1Q9BT22 464 aa32.15■■■□□ 2.74
SSBP4-206ENST00000599699 TRMT13Q9NUP7 481 aaKnown RBP32.15■■■□□ 2.74
SSBP4-206ENST00000599699 MYH7BA7E2Y1 1941 aa32.15■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms