RNA–Protein interactions for RNA: ENST00000599004.1

C19orf48-211, Transcript of chromosome 19 open reading frame 48, humanhuman

TSL 5

Gene C19orf48, Length 866 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-211ENST00000599004 PRRX2Q99811 253 aa13.96□□□□□ -0.17
C19orf48-211ENST00000599004 RALGAPA2Q2PPJ7 1873 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 RSPH10B2B2RC85 870 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 MBTPS2O43462 519 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 UPP2O95045 317 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 F2P00734 622 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 RSPH10BP0C881 870 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 TOP1P11387 765 aaKnown RBP13.95□□□□□ -0.18
C19orf48-211ENST00000599004 THPOP40225 353 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 PLEKHG4Q58EX7 1191 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 IER5LQ5T953 404 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 BMP8AQ7Z5Y6 402 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 RGS22Q8NE09 1264 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 TOP1MTQ969P6 601 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 TMEM47Q9BQJ4 181 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 CFAP54Q96N23 3096 aa13.95□□□□□ -0.18
C19orf48-211ENST00000599004 MYH7BA7E2Y1 1941 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 ATG2AQ2TAZ0 1938 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 STXBP3O00186 592 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 HAS3O00219 553 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 PDHBP11177 359 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 DLX2Q07687 328 aaPredicted RBP13.94□□□□□ -0.18
C19orf48-211ENST00000599004 SMAD4Q13485 552 aaKnown RBP13.94□□□□□ -0.18
C19orf48-211ENST00000599004 LAMC2Q13753 1193 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 STXBP2Q15833 593 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 PKN1Q16512 942 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 CTC1Q2NKJ3 1217 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 USH1GQ495M9 461 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 SUGP1Q8IWZ8 645 aaKnown RBP13.94□□□□□ -0.18
C19orf48-211ENST00000599004 PPTC7Q8NI37 304 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 NSUN6Q8TEA1 469 aaKnown RBP13.94□□□□□ -0.18
C19orf48-211ENST00000599004 EMID1Q96A84 441 aaPredicted RBP13.94□□□□□ -0.18
C19orf48-211ENST00000599004 PBXIP1Q96AQ6 731 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 DDX41Q9UJV9 622 aaKnown RBP13.94□□□□□ -0.18
C19orf48-211ENST00000599004 COL4A6Q14031 1691 aa13.94□□□□□ -0.18
C19orf48-211ENST00000599004 TMEM221A6NGB7 291 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 M0R296 226 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 ORC4O43929 436 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 GFRA3O60609 400 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 CTNNB1P35222 781 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 TCF15Q12870 199 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 ZMYM1Q5SVZ6 1142 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 TRIM67Q6ZTA4 783 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 SERINC5Q86VE9 423 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 SEPT8Q92599 483 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 TAAR1Q96RJ0 339 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 IWS1Q96ST2 819 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 IFIH1Q9BYX4 1025 aaKnown RBP13.93□□□□□ -0.18
C19orf48-211ENST00000599004 TOMM22Q9NS69 142 aa13.93□□□□□ -0.18
C19orf48-211ENST00000599004 ZFHX2Q9C0A1 2572 aaPredicted RBP13.93□□□□□ -0.18
C19orf48-211ENST00000599004 CACNA1HO95180 2353 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 ZNF543Q08ER8 600 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 HYAL1Q12794 435 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 HIC1Q14526 733 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 RRP12Q5JTH9 1297 aaKnown RBP13.92□□□□□ -0.18
C19orf48-211ENST00000599004 FIBCD1Q8N539 461 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 SYTL5Q8TDW5 730 aaPredicted RBP13.92□□□□□ -0.18
C19orf48-211ENST00000599004 TBC1D5Q92609 795 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 RMDN3Q96TC7 470 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 FSD1Q9BTV5 496 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 C11orf84Q9BUA3 381 aaPredicted RBP13.92□□□□□ -0.18
C19orf48-211ENST00000599004 LMAN2LQ9H0V9 348 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 CD207Q9UJ71 328 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 ANAPC4Q9UJX5 808 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 MRVI1Q9Y6F6 885 aa13.92□□□□□ -0.18
C19orf48-211ENST00000599004 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.91□□□□□ -0.18
C19orf48-211ENST00000599004 GRM6O15303 877 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 FOXP2O15409 715 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 TBX10O75333 385 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 PPFIA4O75335 1185 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 EIF3JO75822 258 aaKnown RBP13.91□□□□□ -0.18
C19orf48-211ENST00000599004 RB1P06400 928 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 FOXK2Q01167 660 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 ARHGEF16Q5VV41 709 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 PI4K2BQ8TCG2 481 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 IL17RAQ96F46 866 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 MAF1Q9H063 256 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 IGFLR1Q9H665 355 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 TCP11L1Q9NUJ3 509 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 COL20A1Q9P218 1284 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 SPTBN4Q9H254 2564 aa13.91□□□□□ -0.18
C19orf48-211ENST00000599004 PTPRZ1P23471 2315 aaPredicted RBP13.9□□□□□ -0.18
C19orf48-211ENST00000599004 C17orf102A2RUQ5 167 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 C5orf67F2Z3F1 127 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 FGRP09769 529 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 HOXD8P13378 290 aaPredicted RBP13.9□□□□□ -0.18
C19orf48-211ENST00000599004 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
C19orf48-211ENST00000599004 GTF2F1P35269 517 aaKnown RBP eCLIP13.9□□□□□ -0.18not detected■■■■□ 22.8
C19orf48-211ENST00000599004 FBXL6Q8N531 539 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 ATP6V0A1Q93050 837 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 FAM86C1Q9NVL1 165 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 RWDD3Q9Y3V2 267 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 KMT2EQ8IZD2 1858 aa13.9□□□□□ -0.18
C19orf48-211ENST00000599004 ABCB11O95342 1321 aa13.9□□□□□ -0.19
C19orf48-211ENST00000599004 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
C19orf48-211ENST00000599004 LINC01565O15544 149 aa13.89□□□□□ -0.19
C19orf48-211ENST00000599004 SORBS3O60504 671 aa13.89□□□□□ -0.19
C19orf48-211ENST00000599004 CSPG5O95196 566 aa13.89□□□□□ -0.19
C19orf48-211ENST00000599004 CTSHP09668 335 aa13.89□□□□□ -0.19
C19orf48-211ENST00000599004 SNHG28P0DPA3 235 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms