RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 LAMC2Q13753 1193 aa26.14■■□□□ 1.78
IRF3-220ENST00000598108 HABP4Q5JVS0 413 aaKnown RBP26.14■■□□□ 1.78
IRF3-220ENST00000598108 PPP1R13LQ8WUF5 828 aa26.14■■□□□ 1.78
IRF3-220ENST00000598108 PRKAG2Q9UGJ0 569 aa26.14■■□□□ 1.78
IRF3-220ENST00000598108 CPLX1O14810 134 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 KPNA6O60684 536 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 PFKFB2O60825 505 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 DTNBO60941 627 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 ITGB5P18084 799 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 SSRP1Q08945 709 aaKnown RBP26.13■■□□□ 1.77
IRF3-220ENST00000598108 GNPTABQ3T906 1256 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 FAM126BQ8IXS8 530 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 ZMYND12Q9H0C1 365 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 SLKQ9H2G2 1235 aaPredicted RBP26.13■■□□□ 1.77
IRF3-220ENST00000598108 TMEM39AQ9NV64 488 aa26.13■■□□□ 1.77
IRF3-220ENST00000598108 ESYT2A0FGR8 921 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 KIAA0355O15063 1070 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 ANKRD1Q15327 319 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 TEX2Q8IWB9 1127 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 PPTC7Q8NI37 304 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 KIF2CQ99661 725 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 GLT8D2Q9H1C3 349 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 VPS54Q9P1Q0 977 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 UBIAD1Q9Y5Z9 338 aa26.12■■□□□ 1.77
IRF3-220ENST00000598108 FIBPO43427 364 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 LARGE1O95461 756 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 FOSP01100 380 aaPredicted RBP26.11■■□□□ 1.77
IRF3-220ENST00000598108 CD4P01730 458 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 BMP8BP34820 402 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 NBPF20Q3BBV1 942 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 HSDL1Q3SXM5 330 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 JAKMIP3Q5VZ66 844 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 TRIM22Q8IYM9 498 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 KAT2BQ92831 832 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 SPATA33Q96N06 139 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 ANO3Q9BYT9 981 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 TRPV6Q9H1D0 765 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 MROH7Q68CQ1 1323 aa26.11■■□□□ 1.77
IRF3-220ENST00000598108 DGKDQ16760 1214 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 ME3Q16798 604 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 NLRX1Q86UT6 975 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 NECAB1Q8N987 351 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 BADQ92934 168 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 AIFM3Q96NN9 605 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 LBHD1Q9BQE6 289 aaPredicted RBP26.1■■□□□ 1.77
IRF3-220ENST00000598108 MLXIPQ9HAP2 919 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 C6orf50Q9HD87 102 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 TBX21Q9UL17 535 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 TELO2Q9Y4R8 837 aa26.1■■□□□ 1.77
IRF3-220ENST00000598108 ATP9AO75110 1047 aa26.09■■□□□ 1.77
IRF3-220ENST00000598108 CTDNEP1O95476 244 aa26.09■■□□□ 1.77
IRF3-220ENST00000598108 HOXD8P13378 290 aaPredicted RBP26.09■■□□□ 1.77
IRF3-220ENST00000598108 AP3B2Q13367 1082 aa26.09■■□□□ 1.77
IRF3-220ENST00000598108 CYP2W1Q8TAV3 490 aa26.09■■□□□ 1.77
IRF3-220ENST00000598108 CCDC12Q8WUD4 166 aaPredicted RBP26.09■■□□□ 1.77
IRF3-220ENST00000598108 B4GALT4O60513 344 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 SREBF1P36956 1147 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 CPLX2Q6PUV4 134 aaKnown RBP26.08■■□□□ 1.77
IRF3-220ENST00000598108 CYFIP1Q7L576 1253 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 RASGRP4Q8TDF6 673 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 GPRASP2Q96D09 838 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 SEZ6LQ9BYH1 1024 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 C22orf23Q9BZE7 217 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 UBE2OQ9C0C9 1292 aaKnown RBP26.08■■□□□ 1.77
IRF3-220ENST00000598108 EHMT1Q9H9B1 1298 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 JADE2Q9NQC1 790 aa26.08■■□□□ 1.77
IRF3-220ENST00000598108 KIAA1217Q5T5P2 1943 aa26.08■■□□□ 1.76
IRF3-220ENST00000598108 PPFIA4O75335 1185 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 DEXIO95424 95 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 CHMP4BP1P59074 171 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 NEDD9Q14511 834 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 METTL7BQ6UX53 244 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 SENP7Q9BQF6 1050 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 SH3GLB2Q9NR46 395 aa26.07■■□□□ 1.76
IRF3-220ENST00000598108 TRMT13Q9NUP7 481 aaKnown RBP26.07■■□□□ 1.76
IRF3-220ENST00000598108 TRIOBPQ9H2D6 2365 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 TLR3O15455 904 aaKnown RBP26.06■■□□□ 1.76
IRF3-220ENST00000598108 ZNF286BP0CG31 522 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 RAG1P15918 1043 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 KCNA2P16389 499 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 GNA11P29992 359 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 ARHGAP4P98171 946 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 NFRKBQ6P4R8 1299 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 REXO1Q8N1G1 1221 aaKnown RBP26.06■■□□□ 1.76
IRF3-220ENST00000598108 MXRA8Q9BRK3 442 aa26.06■■□□□ 1.76
IRF3-220ENST00000598108 RBM25P49756 843 aaKnown RBP26.05■■□□□ 1.76
IRF3-220ENST00000598108 NLRP5P59047 1200 aa26.05■■□□□ 1.76
IRF3-220ENST00000598108 MTMR1Q13613 665 aa26.05■■□□□ 1.76
IRF3-220ENST00000598108 CCDC148Q8NFR7 591 aa26.05■■□□□ 1.76
IRF3-220ENST00000598108 CRYGNQ8WXF5 182 aa26.05■■□□□ 1.76
IRF3-220ENST00000598108 PKD2L1Q9P0L9 805 aa26.05■■□□□ 1.76
IRF3-220ENST00000598108 CDKL5O76039 1030 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 TIMP1P01033 207 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 FAM47CQ5HY64 1035 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 GTF3C6Q969F1 213 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 CDHR1Q96JP9 859 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 GPR20Q99678 358 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 C16orf70Q9BSU1 422 aa26.04■■□□□ 1.76
IRF3-220ENST00000598108 F2P00734 622 aa26.03■■□□□ 1.76
IRF3-220ENST00000598108 ARP10275 920 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms