RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 CELF3Q5SZQ8 465 aaKnown RBP20.87■□□□□ 0.93
ZNF558-204ENST00000596172 PRPF38BQ5VTL8 546 aaKnown RBP20.87■□□□□ 0.93
ZNF558-204ENST00000596172 WASF1Q92558 559 aa20.87■□□□□ 0.93
ZNF558-204ENST00000596172 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
ZNF558-204ENST00000596172 SENP7Q9BQF6 1050 aa20.87■□□□□ 0.93
ZNF558-204ENST00000596172 SH2B1Q9NRF2 756 aaPredicted RBP20.87■□□□□ 0.93
ZNF558-204ENST00000596172 TMEM260Q9NX78 707 aa20.87■□□□□ 0.93
ZNF558-204ENST00000596172 ITGB5P18084 799 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 RTP1P59025 263 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 SEMA3FQ13275 785 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 MYSM1Q5VVJ2 828 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 JAKMIP3Q5VZ66 844 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 CXCL17Q6UXB2 119 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 DHX37Q8IY37 1157 aaKnown RBP20.86■□□□□ 0.93
ZNF558-204ENST00000596172 NSUN7Q8NE18 718 aaKnown RBP20.86■□□□□ 0.93
ZNF558-204ENST00000596172 CRYGNQ8WXF5 182 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 JADE2Q9NQC1 790 aa20.86■□□□□ 0.93
ZNF558-204ENST00000596172 ORC3Q9UBD5 711 aaPredicted RBP20.86■□□□□ 0.93
ZNF558-204ENST00000596172 A0A0U1RQG5 324 aaPredicted RBP20.85■□□□□ 0.93
ZNF558-204ENST00000596172 ADAMTS3O15072 1205 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 ST18O60284 1047 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 CYP3A4P08684 503 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 FDPSP14324 419 aaKnown RBP20.85■□□□□ 0.93
ZNF558-204ENST00000596172 XBP1P17861 261 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 UBA1P22314 1058 aaKnown RBP20.85■□□□□ 0.93
ZNF558-204ENST00000596172 CDK7P50613 346 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 PURAQ00577 322 aaKnown RBP20.85■□□□□ 0.93
ZNF558-204ENST00000596172 NEDD9Q14511 834 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 ANKRD33Q7Z3H0 272 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 SLC43A3Q8NBI5 491 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 DAGLBQ8NCG7 672 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 PPTC7Q8NI37 304 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 AFG1LQ8WV93 481 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 TOX2Q96NM4 488 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 AIFM3Q96NN9 605 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 LLPHQ9BRT6 129 aaKnown RBP20.85■□□□□ 0.93
ZNF558-204ENST00000596172 PCDHA4Q9UN74 947 aa20.85■□□□□ 0.93
ZNF558-204ENST00000596172 H0YGN5 161 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 ARVCFO00192 962 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 GGPS1O95749 300 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 HOXD8P13378 290 aaPredicted RBP20.84■□□□□ 0.93
ZNF558-204ENST00000596172 ARHGAP4P98171 946 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 ST3GAL1Q11201 340 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 C7orf61Q8IZ16 206 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 GIMAP8Q8ND71 665 aaPredicted RBP20.84■□□□□ 0.93
ZNF558-204ENST00000596172 VTI1AQ96AJ9 217 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 PGBD1Q96JS3 809 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 MXRA8Q9BRK3 442 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 MTG1Q9BT17 334 aaPredicted RBP20.84■□□□□ 0.93
ZNF558-204ENST00000596172 KIAA1217Q5T5P2 1943 aa20.84■□□□□ 0.93
ZNF558-204ENST00000596172 M0R2N6 131 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 MEIS1O00470 390 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 PPFIA4O75335 1185 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 MMP3P08254 477 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 MTMR1Q13613 665 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 NPY5RQ15761 445 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 DGKDQ16760 1214 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 TRIM60Q495X7 471 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 CEP55Q53EZ4 464 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 METTL7BQ6UX53 244 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 NIPA1Q7RTP0 329 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 BLIDQ8IZY5 108 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 PHF20Q9BVI0 1012 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 MLXIPQ9HAP2 919 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 ATP11BQ9Y2G3 1177 aa20.83■□□□□ 0.93
ZNF558-204ENST00000596172 MROH7Q68CQ1 1323 aa20.82■□□□□ 0.92
ZNF558-204ENST00000596172 MYL3P08590 195 aa20.82■□□□□ 0.92
ZNF558-204ENST00000596172 MCM2P49736 904 aa20.82■□□□□ 0.92
ZNF558-204ENST00000596172 TLE2Q04725 743 aa20.82■□□□□ 0.92
ZNF558-204ENST00000596172 ITGA7Q13683 1181 aa20.82■□□□□ 0.92
ZNF558-204ENST00000596172 SPATA33Q96N06 139 aa20.82■□□□□ 0.92
ZNF558-204ENST00000596172 GRIN2DO15399 1336 aa20.81■□□□□ 0.92
ZNF558-204ENST00000596172 KCNA2P16389 499 aa20.81■□□□□ 0.92
ZNF558-204ENST00000596172 HSDL1Q3SXM5 330 aa20.81■□□□□ 0.92
ZNF558-204ENST00000596172 RASGRP4Q8TDF6 673 aa20.81■□□□□ 0.92
ZNF558-204ENST00000596172 ALG1Q9BT22 464 aa20.81■□□□□ 0.92
ZNF558-204ENST00000596172 KCNH7Q9NS40 1196 aa20.81■□□□□ 0.92
ZNF558-204ENST00000596172 DCDC2CA8MYV0 355 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 JAK2O60674 1132 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 ATP9AO75110 1047 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 CIITAP33076 1130 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 USP11P51784 963 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 CYFIP1Q7L576 1253 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 CCDC83Q8IWF9 413 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 CYP2W1Q8TAV3 490 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 BCAS3Q9H6U6 928 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 KCNJ14Q9UNX9 436 aa20.8■□□□□ 0.92
ZNF558-204ENST00000596172 ALPK3Q96L96 1907 aa20.79■□□□□ 0.92
ZNF558-204ENST00000596172 ZNF76P36508 570 aa20.79■□□□□ 0.92
ZNF558-204ENST00000596172 IGLV3-22A0A075B6J6 115 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 FAM86B1E9PN63 330 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 PQBP1O60828 265 aaKnown RBP20.78■□□□□ 0.92
ZNF558-204ENST00000596172 DTNBO60941 627 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 FAM86B2P0C5J1 330 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 PSMC6P62333 389 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 HMGN5P82970 282 aaKnown RBP20.78■□□□□ 0.92
ZNF558-204ENST00000596172 PTPN11Q06124 597 aaPredicted RBP20.78■□□□□ 0.92
ZNF558-204ENST00000596172 FAAP100Q0VG06 881 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 NFRKBQ6P4R8 1299 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 FAM126BQ8IXS8 530 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms