RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 SLC3A2P08195 630 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 ZNF286BP0CG31 522 aa16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 DNERQ8NFT8 737 aa16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 DCAF4Q8WV16 495 aa16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 MPHOSPH6Q99547 160 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.19■□□□□ 0.18
SHKBP1-208ENST00000595726 RSPH10B2B2RC85 870 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 GRM6O15303 877 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 RSPH10BP0C881 870 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 THPOP40225 353 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 MFSD10Q14728 455 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 DGKDQ16760 1214 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 PLEKHG4Q58EX7 1191 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 TOP1MTQ969P6 601 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 POP1Q99575 1024 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 NACAP1Q9BZK3 213 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 NAPBQ9H115 298 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 ECHDC1Q9NTX5 307 aa16.18■□□□□ 0.18
SHKBP1-208ENST00000595726 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 HAS3O00219 553 aa16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 SORBS3O60504 671 aa16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 RANBP6O60518 1105 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 TBX10O75333 385 aa16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 SUGP1Q8IWZ8 645 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 TAAR1Q96RJ0 339 aa16.17■□□□□ 0.18
SHKBP1-208ENST00000595726 CTNNB1P35222 781 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 NOVP48745 357 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 VCPP55072 806 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 SMAD4Q13485 552 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 USH1GQ495M9 461 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 PPP4R3BQ5MIZ7 849 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 DHX37Q8IY37 1157 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 FBXL6Q8N531 539 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 IFIH1Q9BYX4 1025 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 LRRCC1Q9C099 1032 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 COL20A1Q9P218 1284 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 EMSYQ7Z589 1322 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 MICAL3Q7RTP6 2002 aa16.16■□□□□ 0.18
SHKBP1-208ENST00000595726 B4DLN1 442 aa16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 NCK2O43639 380 aa16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 F2P00734 622 aa16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 ZFYP08048 801 aaPredicted RBP16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 MRPL12P52815 198 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 ZXDAP98168 799 aa16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 TMEM47Q9BQJ4 181 aa16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 CD207Q9UJ71 328 aa16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 DDX41Q9UJV9 622 aaKnown RBP16.15■□□□□ 0.18
SHKBP1-208ENST00000595726 RIF1Q5UIP0 2472 aaKnown RBP16.14■□□□□ 0.18
SHKBP1-208ENST00000595726 FOXP2O15409 715 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 FOXK2Q01167 660 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 SERINC5Q86VE9 423 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 SEPT8Q92599 483 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 ATOH1Q92858 354 aaPredicted RBP16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 PRRX2Q99811 253 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 KATNAL1Q9BW62 490 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 CPVLQ9H3G5 476 aa16.14■□□□□ 0.17
SHKBP1-208ENST00000595726 H0Y858 1186 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 CTSHP09668 335 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 LINC00271P0C7V0 271 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 PDHBP11177 359 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 BMPR1AP36894 532 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 ADAM15Q13444 863 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 STXBP2Q15833 593 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 FIBCD1Q8N539 461 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 SYTL5Q8TDW5 730 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 IL17RAQ96F46 866 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 TLR9Q9NR96 1032 aa16.13■□□□□ 0.17
SHKBP1-208ENST00000595726 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 LAMC2Q13753 1193 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 PKN1Q16512 942 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 PPTC7Q8NI37 304 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 NSUN6Q8TEA1 469 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 MSLNLQ96KJ4 702 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 RMDN3Q96TC7 470 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 UBA5Q9GZZ9 404 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 DCTPP1Q9H773 170 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 PCDHB15Q9Y5E8 787 aa16.12■□□□□ 0.17
SHKBP1-208ENST00000595726 LOC730098B7Z3J9 87 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 C5orf67F2Z3F1 127 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 TREHO43280 583 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 GOLGA8HP0CJ92 632 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 EIF2AK2P19525 551 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 AVPR2P30518 371 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 NDUFV1P49821 464 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 ZNF543Q08ER8 600 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 CAMK1Q14012 370 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 HSDL1Q3SXM5 330 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 RRP12Q5JTH9 1297 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 ASCL5Q7RTU5 278 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 RGS22Q8NE09 1264 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 ATP6V0A1Q93050 837 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 EMID1Q96A84 441 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 TOMM22Q9NS69 142 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 CLEC1BQ9P126 229 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 MRVI1Q9Y6F6 885 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 ATG2AQ2TAZ0 1938 aa16.11■□□□□ 0.17
SHKBP1-208ENST00000595726 FRYLO94915 3013 aa16.1■□□□□ 0.17
SHKBP1-208ENST00000595726 DMXL1Q9Y485 3027 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms