RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 RABEP1Q15276 862 aa17.59■□□□□ 0.41
USE1-206ENST00000595101 CEP290O15078 2479 aa17.59■□□□□ 0.41
USE1-206ENST00000595101 CDKL5O76039 1030 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 GGPS1O95749 300 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 MYL3P08590 195 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 PURAQ00577 322 aaKnown RBP17.58■□□□□ 0.41
USE1-206ENST00000595101 SNX17Q15036 470 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 HSDL1Q3SXM5 330 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 MYSM1Q5VVJ2 828 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 REXO1Q8N1G1 1221 aaKnown RBP17.58■□□□□ 0.41
USE1-206ENST00000595101 CCDC12Q8WUD4 166 aaPredicted RBP17.58■□□□□ 0.41
USE1-206ENST00000595101 GLT1D1Q96MS3 346 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 UIMC1Q96RL1 719 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 SH3GLB2Q9NR46 395 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 PKD2L1Q9P0L9 805 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 UBIAD1Q9Y5Z9 338 aa17.58■□□□□ 0.41
USE1-206ENST00000595101 GNA11P29992 359 aa17.58■□□□□ 0.4
USE1-206ENST00000595101 ICAM3P32942 547 aa17.58■□□□□ 0.4
USE1-206ENST00000595101 SREBF1P36956 1147 aa17.58■□□□□ 0.4
USE1-206ENST00000595101 FOSBP53539 338 aa17.58■□□□□ 0.4
USE1-206ENST00000595101 CELF3Q5SZQ8 465 aaKnown RBP17.58■□□□□ 0.4
USE1-206ENST00000595101 DHX37Q8IY37 1157 aaKnown RBP17.58■□□□□ 0.4
USE1-206ENST00000595101 CRYGNQ8WXF5 182 aa17.58■□□□□ 0.4
USE1-206ENST00000595101 LAMA3Q16787 3333 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 STK36Q9NRP7 1315 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 FOSP01100 380 aaPredicted RBP17.57■□□□□ 0.4
USE1-206ENST00000595101 MMP3P08254 477 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 CPT1AP50416 773 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 ARHGAP4P98171 946 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 TLE2Q04725 743 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 AP3B2Q13367 1082 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 GNPTABQ3T906 1256 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 XRRA1Q6P2D8 792 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 CYFIP1Q7L576 1253 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 SH3RF1Q7Z6J0 888 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 ALG1Q9BT22 464 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 GLT8D2Q9H1C3 349 aa17.57■□□□□ 0.4
USE1-206ENST00000595101 ELP1O95163 1332 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 FAM86B1E9PN63 330 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 M0R2N6 131 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 FIBPO43427 364 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 PQBP1O60828 265 aaKnown RBP17.56■□□□□ 0.4
USE1-206ENST00000595101 STAM2O75886 525 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 FAM86B2P0C5J1 330 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 ARP10275 920 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 TGFB3P10600 412 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 OXER1Q8TDS5 423 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 SPATA33Q96N06 139 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 MXRA8Q9BRK3 442 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 PHF20Q9BVI0 1012 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 PCDHA4Q9UN74 947 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 KIAA1217Q5T5P2 1943 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 ZEB2O60315 1214 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 CDK7P50613 346 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 SP4Q02446 784 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 C1orf53Q5VUE5 145 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 EMID1Q96A84 441 aaPredicted RBP17.56■□□□□ 0.4
USE1-206ENST00000595101 JADE2Q9NQC1 790 aa17.56■□□□□ 0.4
USE1-206ENST00000595101 RBAK-RBAKDNI3L0D1 243 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 KCNA2P16389 499 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 CHMP4BP1P59074 171 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 MTMR1Q13613 665 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 ITGA7Q13683 1181 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 LAMC2Q13753 1193 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 KCNV1Q6PIU1 500 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 NLRX1Q86UT6 975 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 BLIDQ8IZY5 108 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 PPTC7Q8NI37 304 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 KAT2BQ92831 832 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 GPRASP2Q96D09 838 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 MLXIPQ9HAP2 919 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 KCNH7Q9NS40 1196 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 NR2E3Q9Y5X4 410 aa17.55■□□□□ 0.4
USE1-206ENST00000595101 A0A0U1RQG5 324 aaPredicted RBP17.54■□□□□ 0.4
USE1-206ENST00000595101 TRIM43BA6NCK2 446 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 ARVCFO00192 962 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 ZNF286BP0CG31 522 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 ITGB8P26012 769 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 CEP55Q53EZ4 464 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 PRPF38BQ5VTL8 546 aaKnown RBP17.54■□□□□ 0.4
USE1-206ENST00000595101 BICD2Q8TD16 824 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 TRIM43Q96BQ3 446 aaPredicted RBP17.54■□□□□ 0.4
USE1-206ENST00000595101 EHMT1Q9H9B1 1298 aa17.54■□□□□ 0.4
USE1-206ENST00000595101 MEIS1O00470 390 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 FAAP100Q0VG06 881 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 NBPF20Q3BBV1 942 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 EARS2Q5JPH6 523 aaKnown RBP17.53■□□□□ 0.4
USE1-206ENST00000595101 TEX2Q8IWB9 1127 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 SLC43A3Q8NBI5 491 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 TBCKQ8TEA7 893 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 ZSCAN31Q96LW9 406 aaPredicted RBP17.53■□□□□ 0.4
USE1-206ENST00000595101 PRDM5Q9NQX1 630 aaPredicted RBP17.53■□□□□ 0.4
USE1-206ENST00000595101 PDLIM7Q9NR12 457 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 IGLV3-22A0A075B6J6 115 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 ST18O60284 1047 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 CABYRO75952 493 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 CYP3A4P08684 503 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 NR5A1Q13285 461 aa17.53■□□□□ 0.4
USE1-206ENST00000595101 ITGB3BPQ13352 177 aaPredicted RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms