RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 KRT31Q15323 416 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 ZYXQ15942 572 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 NBPF9Q3BBW0 867 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 FILIP1LQ4L180 1135 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 KIAA1755Q5JYT7 1200 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 KRT79Q5XKE5 535 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 FOXR1Q6PIV2 292 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 LRRC31Q6UY01 552 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 GIMAP8Q8ND71 665 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 WDR24Q96S15 920 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 GLT8D2Q9H1C3 349 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 EXOC1Q9NV70 894 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 CEP83Q9Y592 693 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 PPFIA4O75335 1185 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 AMPD3Q01432 767 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 PDIA5Q14554 519 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 SV2BQ7L1I2 683 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 TC2NQ8N9U0 490 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 MSANTD4Q8NCY6 345 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 CPLX3Q8WVH0 158 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 HPS3Q969F9 1004 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 P2RX7Q99572 595 aaKnown RBP18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 C7orf25Q9BPX7 421 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 VPS16Q9H269 839 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 ARHGEF10LQ9HCE6 1279 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 BLOC1S4Q9NUP1 217 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 ZBTB21Q9ULJ3 1066 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 L1RE1Q9UN81 338 aa18.97■□□□□ 0.63
SHKBP1-205ENST00000594973 KCNJ18B7U540 433 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 FCER1AP12319 257 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 STIM1Q13586 685 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TUBB2AQ13885 445 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 KCNJ12Q14500 433 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 EEF2KMTQ96G04 330 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TUBB2BQ9BVA1 445 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TAB2Q9NYJ8 693 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 PCDHA12Q9UN75 941 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 PSMA7O14818 248 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 N4BP3O15049 544 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TUBBP07437 444 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 STK4Q13043 487 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 DALRD3Q5D0E6 543 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TCP11X2Q5H9J9 407 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 SRGAP1Q7Z6B7 1085 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TADA2BQ86TJ2 420 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 RPAINQ86UA6 219 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 TMEM139Q8IV31 216 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 AGBL3Q8NEM8 1001 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 LARP4BQ92615 738 aaKnown RBP18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 BAG1Q99933 345 aaPredicted RBP18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 PRR12Q9ULL5 1215 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 FAN1Q9Y2M0 1017 aa18.96■□□□□ 0.63
SHKBP1-205ENST00000594973 GCFC2P16383 781 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 HOXA13P31271 388 aaPredicted RBP18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 STAT2P52630 851 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 FAM83BQ5T0W9 1011 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 DYMQ7RTS9 669 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 GPATCH11Q8N954 259 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 CCDC47Q96A33 483 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 TRIM47Q96LD4 638 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 GBP3Q9H0R5 595 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 ACBD3Q9H3P7 528 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 MED4Q9NPJ6 270 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 DONSONQ9NYP3 566 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 PSME4Q14997 1843 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 WNT10BO00744 389 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 KIF1CO43896 1103 aaKnown RBP18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 CHMP4BP1P59074 171 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 ECM1Q16610 540 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 HSP90B2PQ58FF3 399 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 KCNK18Q7Z418 384 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 CEP112Q8N8E3 955 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 JDP2Q8WYK2 163 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 TAOK3Q9H2K8 898 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 MYH7BA7E2Y1 1941 aa18.95■□□□□ 0.62
SHKBP1-205ENST00000594973 MYMKA6NI61 221 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 STX10O60499 249 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 RBL2Q08999 1139 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 DNAJC21Q5F1R6 531 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 CCDC84Q86UT8 332 aaPredicted RBP18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 ANKRD20A12PQ8NF67 263 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 CXorf56Q9H5V9 222 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 STK17AQ9UEE5 414 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 LIMA1Q9UHB6 759 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 TMX2Q9Y320 296 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 SPDYE3A6NKU9 549 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 H7C1D1 291 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 COPB1P53618 953 aaKnown RBP18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 TGFB2P61812 414 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 ARHGAP4P98171 946 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 SPAG1Q07617 926 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 CIAPIN1Q6FI81 312 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 PPFIBP1Q86W92 1011 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 ANKZF1Q9H8Y5 726 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 GOPCQ9HD26 462 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 SLC39A2Q9NP94 309 aa18.94■□□□□ 0.62
SHKBP1-205ENST00000594973 PBX1P40424 430 aa18.93■□□□□ 0.62
SHKBP1-205ENST00000594973 USP11P51784 963 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms