RNA–Protein interactions for RNA: ENST00000592540.5

SPC24-206, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPC24, Length 2,315 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-206ENST00000592540 GRB10Q13322 594 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 CEP85LQ5SZL2 805 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 PPP4R3AQ6IN85 833 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 ARHGAP27Q6ZUM4 889 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 TANGO6Q9C0B7 1094 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 E7EVH7 732 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 RAD51CO43502 376 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 CAMTA2O94983 1202 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 SERPING1P05155 500 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 KLRC1P26715 233 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 SFMBT2Q5VUG0 894 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 INTS5Q6P9B9 1019 aaKnown RBP19.81■□□□□ 0.76
SPC24-206ENST00000592540 DYMQ7RTS9 669 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 SYN2Q92777 582 aaPredicted RBP19.81■□□□□ 0.76
SPC24-206ENST00000592540 TMBIM4Q9HC24 238 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 LUC7LQ9NQ29 371 aaKnown RBP19.81■□□□□ 0.76
SPC24-206ENST00000592540 CEP72Q9P209 647 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 MTMR7Q9Y216 660 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 PCDHGC5Q9Y5F6 944 aa19.81■□□□□ 0.76
SPC24-206ENST00000592540 RNASE9P60153 205 aaKnown RBP19.8■□□□□ 0.76
SPC24-206ENST00000592540 IFT88Q13099 833 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 NEK8Q86SG6 692 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 JPH2Q9BR39 696 aaPredicted RBP19.8■□□□□ 0.76
SPC24-206ENST00000592540 NUCKS1Q9H1E3 243 aaKnown RBP19.8■□□□□ 0.76
SPC24-206ENST00000592540 PACSIN2Q9UNF0 486 aaPredicted RBP19.8■□□□□ 0.76
SPC24-206ENST00000592540 NOL4O94818 638 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 MYBP10242 640 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 NAPAP54920 295 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 EHHADHQ08426 723 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 C6orf89Q6UWU4 347 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 USP38Q8NB14 1042 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 TAF1DQ9H5J8 278 aaPredicted RBP19.8■□□□□ 0.76
SPC24-206ENST00000592540 PLCB1Q9NQ66 1216 aa19.8■□□□□ 0.76
SPC24-206ENST00000592540 USP17L3A6NCW0 530 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 USP17L4A6NCW7 530 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 PALM3A6NDB9 673 aaPredicted RBP19.79■□□□□ 0.76
SPC24-206ENST00000592540 SMTNP53814 917 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 TNNC1P63316 161 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 PLCB4Q15147 1175 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 FAM83BQ5T0W9 1011 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 USP17L1Q7RTZ2 530 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 FBXO33Q7Z6M2 555 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 LARP4BQ92615 738 aaKnown RBP19.79■□□□□ 0.76
SPC24-206ENST00000592540 CCDC87Q9NVE4 849 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 STK17AQ9UEE5 414 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 MINPP1Q9UNW1 487 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 GOLGA6L10A6NI86 522 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 HPDP32754 393 aaPredicted RBP19.79■□□□□ 0.76
SPC24-206ENST00000592540 TXKP42681 527 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 LRIG3Q6UXM1 1119 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 CCDC13Q8IYE1 715 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.79■□□□□ 0.76
SPC24-206ENST00000592540 DYNLL2Q96FJ2 89 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 PNMA5Q96PV4 448 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 TSG101Q99816 390 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 BSDC1Q9NW68 430 aaPredicted RBP19.79■□□□□ 0.76
SPC24-206ENST00000592540 TMEM59LQ9UK28 342 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 ATP6V0A2Q9Y487 856 aa19.79■□□□□ 0.76
SPC24-206ENST00000592540 SMCO2A6NFE2 343 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 PRDX5P30044 214 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 ATP6V1AP38606 617 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 CCDC40Q4G0X9 1142 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 C12orf60Q5U649 245 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 KLHL7Q8IXQ5 586 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 ARFGAP2Q8N6H7 521 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 TBC1D5Q92609 795 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 CYFIP2Q96F07 1278 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 ISCUQ9H1K1 167 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 PPANQ9NQ55 473 aaKnown RBP19.78■□□□□ 0.76
SPC24-206ENST00000592540 KLC4Q9NSK0 619 aa19.78■□□□□ 0.76
SPC24-206ENST00000592540 GOLGA8HP0CJ92 632 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 DRP2Q13474 957 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 LRRC41Q15345 812 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 SLC18A3Q16572 532 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 CD248Q9HCU0 757 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 C6orf50Q9HD87 102 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 RIC8AQ9NPQ8 531 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 MAST2Q6P0Q8 1798 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 GCOM1H8Y6P7 765 aaPredicted RBP19.77■□□□□ 0.76
SPC24-206ENST00000592540 CHUKO15111 745 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 RASSF9O75901 435 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 MYZAPP0CAP1 466 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 KLRK1P26718 216 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 HSD17B3P37058 310 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 POLR2FP61218 127 aaKnown RBP19.77■□□□□ 0.76
SPC24-206ENST00000592540 ERVK-9P63128 1117 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 HLTFQ14527 1009 aaKnown RBP eCLIP19.77■□□□□ 0.76
SPC24-206ENST00000592540 KIAA0753Q2KHM9 967 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 EIF1ADQ8N9N8 165 aaKnown RBP19.77■□□□□ 0.76
SPC24-206ENST00000592540 GLIS3Q8NEA6 775 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 TBCKQ8TEA7 893 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 CPVLQ9H3G5 476 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 CENPHQ9H3R5 247 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 ATAD5Q96QE3 1844 aa19.77■□□□□ 0.76
SPC24-206ENST00000592540 ECHS1P30084 290 aa19.76■□□□□ 0.75
SPC24-206ENST00000592540 C3orf67Q6ZVT6 689 aa19.76■□□□□ 0.75
SPC24-206ENST00000592540 PROM2Q8N271 834 aa19.76■□□□□ 0.75
SPC24-206ENST00000592540 ZKSCAN4Q969J2 545 aaPredicted RBP19.76■□□□□ 0.75
SPC24-206ENST00000592540 CDK5RAP3Q96JB5 506 aa19.76■□□□□ 0.75
SPC24-206ENST00000592540 LZTS2Q9BRK4 669 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms