RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 XRRA1Q6P2D8 792 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 LRRC8DQ7L1W4 858 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 USP38Q8NB14 1042 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 CTCFLQ8NI51 663 aaPredicted RBP21.82■■□□□ 1.08
CCDC43-205ENST00000592333 HDAC6Q9UBN7 1215 aa21.82■■□□□ 1.08
CCDC43-205ENST00000592333 ICAM3P32942 547 aa21.81■■□□□ 1.08
CCDC43-205ENST00000592333 CHMP4BP1P59074 171 aa21.81■■□□□ 1.08
CCDC43-205ENST00000592333 CASC1Q6TDU7 716 aa21.81■■□□□ 1.08
CCDC43-205ENST00000592333 TMEM87BQ96K49 555 aa21.81■■□□□ 1.08
CCDC43-205ENST00000592333 SPATA33Q96N06 139 aa21.81■■□□□ 1.08
CCDC43-205ENST00000592333 SENP2Q9HC62 589 aa21.81■■□□□ 1.08
CCDC43-205ENST00000592333 RBM8AQ9Y5S9 174 aaKnown RBP21.81■■□□□ 1.08
CCDC43-205ENST00000592333 SCN5AQ14524 2016 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 PIK3CDO00329 1044 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 GGPS1O95749 300 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 CKBP12277 381 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 ANTXR2P58335 489 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 NEDD9Q14511 834 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 HSDL1Q3SXM5 330 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 CNKSR3Q6P9H4 555 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 HERC6Q8IVU3 1022 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 DHX38Q92620 1227 aaKnown RBP21.8■■□□□ 1.08
CCDC43-205ENST00000592333 RRP36Q96EU6 259 aaKnown RBP21.8■■□□□ 1.08
CCDC43-205ENST00000592333 INPP4AQ96PE3 977 aaPredicted RBP21.8■■□□□ 1.08
CCDC43-205ENST00000592333 TSPYL2Q9H2G4 693 aaPredicted RBP21.8■■□□□ 1.08
CCDC43-205ENST00000592333 MLXIPQ9HAP2 919 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 THEGQ9P2T0 379 aa21.8■■□□□ 1.08
CCDC43-205ENST00000592333 CHD7Q9P2D1 2997 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 ABHD14A-ACY1A0A1B0GW23 586 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 CALM1P0DP23 149 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 CALM2P0DP24 149 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 CALM3P0DP25 149 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 UBA1P22314 1058 aaKnown RBP21.79■■□□□ 1.08
CCDC43-205ENST00000592333 IGFBP4P22692 258 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 MCM5P33992 734 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 LIFRP42702 1097 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 KCNJ6P48051 423 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 FCHSD1Q86WN1 690 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 ZNF654Q8IZM8 581 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 ALG1Q9BT22 464 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 USP26Q9BXU7 913 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 LY9Q9HBG7 655 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 TAF6LQ9Y6J9 622 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 MYO9BQ13459 2157 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 EMSYQ7Z589 1322 aa21.79■■□□□ 1.08
CCDC43-205ENST00000592333 SPTBN5Q9NRC6 3674 aaKnown RBP21.78■■□□□ 1.08
CCDC43-205ENST00000592333 CA3P07451 260 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 MYOGP15173 224 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 SP2Q02086 613 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 GPNMBQ14956 572 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 IL31RAQ8NI17 732 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 PPP1R13LQ8WUF5 828 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 CUL5Q93034 780 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 SENP7Q9BQF6 1050 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 C16orf70Q9BSU1 422 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 SEC63Q9UGP8 760 aaKnown RBP21.78■■□□□ 1.08
CCDC43-205ENST00000592333 MYH7BA7E2Y1 1941 aa21.78■■□□□ 1.08
CCDC43-205ENST00000592333 SPATA31C2B4DYI2 1134 aa21.77■■□□□ 1.08
CCDC43-205ENST00000592333 FIBPO43427 364 aa21.77■■□□□ 1.08
CCDC43-205ENST00000592333 ZNF286BP0CG31 522 aa21.77■■□□□ 1.08
CCDC43-205ENST00000592333 HOXC8P31273 242 aa21.77■■□□□ 1.08
CCDC43-205ENST00000592333 TRIM71Q2Q1W2 868 aaKnown RBP21.77■■□□□ 1.08
CCDC43-205ENST00000592333 METTL7BQ6UX53 244 aa21.77■■□□□ 1.08
CCDC43-205ENST00000592333 TEX2Q8IWB9 1127 aa21.77■■□□□ 1.08
CCDC43-205ENST00000592333 GIMAP8Q8ND71 665 aaPredicted RBP21.77■■□□□ 1.08
CCDC43-205ENST00000592333 TRIP12Q14669 1992 aaPredicted RBP21.77■■□□□ 1.08
CCDC43-205ENST00000592333 TTC28Q96AY4 2481 aa21.77■■□□□ 1.07
CCDC43-205ENST00000592333 H3BRB1 525 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 PRC1O43663 620 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 CAND2O75155 1236 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 WDR5P61964 334 aaKnown RBP21.76■■□□□ 1.07
CCDC43-205ENST00000592333 MRPS5P82675 430 aaKnown RBP21.76■■□□□ 1.07
CCDC43-205ENST00000592333 MRPS9P82933 396 aaKnown RBP21.76■■□□□ 1.07
CCDC43-205ENST00000592333 PCNX4Q63HM2 1172 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 SERINC5Q86VE9 423 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 SMARCC2Q8TAQ2 1214 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 ASB2Q96Q27 587 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 LSG1Q9H089 658 aaKnown RBP21.76■■□□□ 1.07
CCDC43-205ENST00000592333 TUT1Q9H6E5 874 aaKnown RBP21.76■■□□□ 1.07
CCDC43-205ENST00000592333 TRANK1O15050 2925 aa21.76■■□□□ 1.07
CCDC43-205ENST00000592333 BAZ2BQ9UIF8 2168 aaKnown RBP21.75■■□□□ 1.07
CCDC43-205ENST00000592333 CCDC69A6NI79 296 aa21.75■■□□□ 1.07
CCDC43-205ENST00000592333 NOP56O00567 594 aaKnown RBP21.75■■□□□ 1.07
CCDC43-205ENST00000592333 GTPBP6O43824 516 aaPredicted RBP21.75■■□□□ 1.07
CCDC43-205ENST00000592333 NBNO60934 754 aa21.75■■□□□ 1.07
CCDC43-205ENST00000592333 TAP1Q03518 808 aa21.75■■□□□ 1.07
CCDC43-205ENST00000592333 IKBKEQ14164 716 aa21.75■■□□□ 1.07
CCDC43-205ENST00000592333 TET1Q8NFU7 2136 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 SH2B2O14492 632 aaPredicted RBP21.74■■□□□ 1.07
CCDC43-205ENST00000592333 TLL1O43897 1013 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 GNAT1P11488 350 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 NECTIN1Q15223 517 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 ZNF618Q5T7W0 954 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 TRAF7Q6Q0C0 670 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 PPM1EQ8WY54 764 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 CDHR1Q96JP9 859 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 ESYT1Q9BSJ8 1104 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 LMCD1Q9NZU5 365 aa21.74■■□□□ 1.07
CCDC43-205ENST00000592333 C17orf102A2RUQ5 167 aa21.73■■□□□ 1.07
CCDC43-205ENST00000592333 MEIS2O14770 477 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms