RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CYP2C9P11712 490 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 CCL23P55773 120 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 C8orf34Q49A92 452 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 PHKBQ93100 1093 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 VWCEQ96DN2 955 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 FAM161BQ96MY7 647 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 WNT8AQ9H1J5 351 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 MRVI1Q9Y6F6 885 aa16■□□□□ 0.15
CLIP3-205ENST00000592017 BAZ2BQ9UIF8 2168 aaKnown RBP16■□□□□ 0.15
CLIP3-205ENST00000592017 STXBP3O00186 592 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 PIK3CDO00329 1044 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 MEIS2O14770 477 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 AKAP17AQ02040 695 aaKnown RBP15.99■□□□□ 0.15
CLIP3-205ENST00000592017 RASIP1Q5U651 963 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 TYW1BQ6NUM6 668 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 NFRKBQ6P4R8 1299 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 ZNF365Q70YC5 407 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 KAT2BQ92831 832 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 EMID1Q96A84 441 aaPredicted RBP15.99■□□□□ 0.15
CLIP3-205ENST00000592017 GUCD1Q96NT3 240 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 SLC26A6Q9BXS9 759 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 SEMA6BQ9H3T3 888 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 IL23AQ9NPF7 189 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 STXBP5LQ9Y2K9 1186 aa15.99■□□□□ 0.15
CLIP3-205ENST00000592017 SPDYE3A6NKU9 549 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 SORBS3O60504 671 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 SUPT20HL2P0C7V6 817 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 SCG2P13521 617 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 ADCY7P51828 1080 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 EVCP57679 992 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 SP2Q02086 613 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 LAMC2Q13753 1193 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 FAM47CQ5HY64 1035 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 PPP1R18Q6NYC8 613 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 TTYH1Q9H313 450 aaPredicted RBP15.98■□□□□ 0.15
CLIP3-205ENST00000592017 BARHL2Q9NY43 387 aa15.98■□□□□ 0.15
CLIP3-205ENST00000592017 FRMPD4Q14CM0 1322 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 A0A0C4DFX4 3053 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 GRXCR1A8MXD5 290 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 hCG_1984214I3L0E3 225 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 CPLX1O14810 134 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 CHMP4BP1P59074 171 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 MRPS9P82933 396 aaKnown RBP15.97■□□□□ 0.15
CLIP3-205ENST00000592017 PFKFB3Q16875 520 aaPredicted RBP15.97■□□□□ 0.15
CLIP3-205ENST00000592017 ZNF697Q5TEC3 545 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 DHX37Q8IY37 1157 aaKnown RBP15.97■□□□□ 0.15
CLIP3-205ENST00000592017 ZNF713Q8N859 430 aaPredicted RBP15.97■□□□□ 0.15
CLIP3-205ENST00000592017 ZNF274Q96GC6 653 aaPredicted RBP15.97■□□□□ 0.15
CLIP3-205ENST00000592017 BCAS3Q9H6U6 928 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 RTEL1Q9NZ71 1219 aa15.97■□□□□ 0.15
CLIP3-205ENST00000592017 CXXC1Q9P0U4 656 aaPredicted RBP15.97■□□□□ 0.15
CLIP3-205ENST00000592017 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.96■□□□□ 0.15
CLIP3-205ENST00000592017 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.96■□□□□ 0.15
CLIP3-205ENST00000592017 SMCO2A6NFE2 343 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PRPF3O43395 683 aaKnown RBP15.96■□□□□ 0.15
CLIP3-205ENST00000592017 IFNAR1P17181 557 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 AK2P54819 239 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PTPN11Q06124 597 aaPredicted RBP15.96■□□□□ 0.15
CLIP3-205ENST00000592017 DGKDQ16760 1214 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 CELF3Q5SZQ8 465 aaKnown RBP15.96■□□□□ 0.15
CLIP3-205ENST00000592017 MYSM1Q5VVJ2 828 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PSRC1Q6PGN9 363 aaPredicted RBP15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PPTC7Q8NI37 304 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 HERVK_113Q902F9 699 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 SCLYQ96I15 445 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PGBD1Q96JS3 809 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 CTAGE1Q96RT6 745 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 RIC8AQ9NPQ8 531 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PCDHA6Q9UN73 950 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 PCDHA8Q9Y5H6 950 aa15.96■□□□□ 0.15
CLIP3-205ENST00000592017 GGPS1O95749 300 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 FGBP02675 491 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 TGFB3P10600 412 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 HOXD8P13378 290 aaPredicted RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 UBA1P22314 1058 aaKnown RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 ANKRD1Q15327 319 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 NTRK3Q16288 839 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 PKN1Q16512 942 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 HSDL1Q3SXM5 330 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 PCNX4Q63HM2 1172 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 GDF6Q6KF10 455 aaPredicted RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 KCNV1Q6PIU1 500 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 CPLX2Q6PUV4 134 aaKnown RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 SESTD1Q86VW0 696 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 TRIM22Q8IYM9 498 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 CDX2Q99626 313 aaPredicted RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 RNF26Q9BY78 433 aaPredicted RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 SLKQ9H2G2 1235 aaPredicted RBP15.95■□□□□ 0.14
CLIP3-205ENST00000592017 EHMT1Q9H9B1 1298 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 TPCN1Q9ULQ1 816 aa15.95■□□□□ 0.14
CLIP3-205ENST00000592017 SPATA31C2B4DYI2 1134 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 STAM2O75886 525 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 ZNF286BP0CG31 522 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 PBX2P40425 430 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 PSEN2P49810 448 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 NEK4P51957 841 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 SSRP1Q08945 709 aaKnown RBP15.94■□□□□ 0.14
CLIP3-205ENST00000592017 SEMA3FQ13275 785 aa15.94■□□□□ 0.14
CLIP3-205ENST00000592017 OTOP2Q7RTS6 562 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms