RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 XBP1P17861 261 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 MDM2Q00987 491 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-227ENST00000591849 ARHGAP1Q07960 439 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 AP3B2Q13367 1082 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 NEDD9Q14511 834 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 SNX17Q15036 470 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 C8orf34Q49A92 452 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 GIMAP8Q8ND71 665 aaPredicted RBP11.52□□□□□ -0.57
BRCA1-227ENST00000591849 CDHR1Q96JP9 859 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 TOX2Q96NM4 488 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 C22orf23Q9BZE7 217 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 UBE2OQ9C0C9 1292 aaKnown RBP11.52□□□□□ -0.57
BRCA1-227ENST00000591849 TPCN1Q9ULQ1 816 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 NID2Q14112 1375 aa11.52□□□□□ -0.57
BRCA1-227ENST00000591849 SPATA31C2B4DYI2 1134 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PFKFB2O60825 505 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 RGS20O76081 388 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 MMP3P08254 477 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 MAGEA10P43363 369 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-227ENST00000591849 MRPS9P82933 396 aaKnown RBP11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PURAQ00577 322 aaKnown RBP11.51□□□□□ -0.57
BRCA1-227ENST00000591849 SP4Q02446 784 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 NTRK3Q16288 839 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PKN1Q16512 942 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 CELF3Q5SZQ8 465 aaKnown RBP11.51□□□□□ -0.57
BRCA1-227ENST00000591849 TYW1BQ6NUM6 668 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 ANKRD33Q7Z3H0 272 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 REXO1Q8N1G1 1221 aaKnown RBP11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PPTC7Q8NI37 304 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 GPRASP2Q96D09 838 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PGBD1Q96JS3 809 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 INPP4AQ96PE3 977 aaPredicted RBP11.51□□□□□ -0.57
BRCA1-227ENST00000591849 ANO3Q9BYT9 981 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PDLIM7Q9NR12 457 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 TMEM260Q9NX78 707 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 PKD2L1Q9P0L9 805 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 VPS54Q9P1Q0 977 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
BRCA1-227ENST00000591849 MCM3APO60318 1980 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 ESYT2A0FGR8 921 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 MAFGO15525 162 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 PPFIA4O75335 1185 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 SUPT20HL2P0C7V6 817 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 UBA1P22314 1058 aaKnown RBP11.5□□□□□ -0.57
BRCA1-227ENST00000591849 ICAM3P32942 547 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 CDK7P50613 346 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 SCRN1Q12765 414 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 MTMR1Q13613 665 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 MYSM1Q5VVJ2 828 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 SH3RF1Q7Z6J0 888 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 NECAB1Q8N987 351 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 WASF1Q92558 559 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 EMID1Q96A84 441 aaPredicted RBP11.5□□□□□ -0.57
BRCA1-227ENST00000591849 ALG1Q9BT22 464 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 KATNAL1Q9BW62 490 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 ZMYND12Q9H0C1 365 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 SH3GLB2Q9NR46 395 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 FRMPD4Q14CM0 1322 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 MYH6P13533 1939 aa11.5□□□□□ -0.57
BRCA1-227ENST00000591849 DNAH12Q6ZR08 3092 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 TRIM43BA6NCK2 446 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 ARHGAP4P98171 946 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 SP2Q02086 613 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 FAAP100Q0VG06 881 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 UTP14CQ5TAP6 766 aaKnown RBP11.49□□□□□ -0.57
BRCA1-227ENST00000591849 METTL7BQ6UX53 244 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 C7orf31Q8N865 590 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 BADQ92934 168 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 TRIM43Q96BQ3 446 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-227ENST00000591849 IL17RAQ96F46 866 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 SENP7Q9BQF6 1050 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 MXRA8Q9BRK3 442 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 TRPV6Q9H1D0 765 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 JADE2Q9NQC1 790 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 ORC3Q9UBD5 711 aaPredicted RBP11.49□□□□□ -0.57
BRCA1-227ENST00000591849 LIMCH1Q9UPQ0 1083 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 UBIAD1Q9Y5Z9 338 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 CUL9Q8IWT3 2517 aa11.49□□□□□ -0.57
BRCA1-227ENST00000591849 KIAA0355O15063 1070 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 ITGB5P18084 799 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 SREBF1P36956 1147 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 PSEN2P49810 448 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 MFSD10Q14728 455 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 ME3Q16798 604 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 HSDL1Q3SXM5 330 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 CEP55Q53EZ4 464 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 GALNT17Q6IS24 598 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 NFRKBQ6P4R8 1299 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 PLA2G4DQ86XP0 818 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 FAM126BQ8IXS8 530 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 TMEM199Q8N511 208 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 RASGRP4Q8TDF6 673 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 ZSCAN31Q96LW9 406 aaPredicted RBP11.48□□□□□ -0.57
BRCA1-227ENST00000591849 GDF15Q99988 308 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 SDF4Q9BRK5 362 aa11.48□□□□□ -0.57
BRCA1-227ENST00000591849 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms