RNA–Protein interactions for RNA: ENST00000591595.5

SMARCA4-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 3,377 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-217ENST00000591595 TRPV5Q9NQA5 729 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 ADGRG1Q9Y653 693 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 TNS3Q68CZ2 1445 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 MDH1P40925 334 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 LBRQ14739 615 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 ERICH1Q86X53 443 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 RRP36Q96EU6 259 aaKnown RBP13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 TRIM11Q96F44 468 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 FGD4Q96M96 766 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 SYT15Q9BQS2 421 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 NDST4Q9H3R1 872 aa13.41□□□□□ -0.26
SMARCA4-217ENST00000591595 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ZFXP17010 805 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ERCC5P28715 1186 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NR1I3Q14994 352 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ZNF174Q15697 407 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ANO7Q6IWH7 933 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 MYOCDQ8IZQ8 938 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NEK9Q8TD19 979 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 AENQ8WTP8 325 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 SDR42E1Q8WUS8 393 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 CTNNBL1Q8WYA6 563 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 PIGBQ92521 554 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 KIFAP3Q92845 792 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 PCDH18Q9HCL0 1135 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 SEC31BQ9NQW1 1179 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 SRRM3A6NNA2 597 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ACTN4O43707 911 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 HSF2BPO75031 334 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 GHRP10912 638 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NR1D1P20393 614 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 CCND1P24385 295 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 CASP14P31944 242 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 APBA1Q02410 837 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ALX1Q15699 326 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 SGSM1Q2NKQ1 1148 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 SPATA1Q5VX52 437 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 LMNTD2Q8IXW0 634 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NME8Q8N427 588 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 DMAP1Q9NPF5 467 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 UBAP1Q9NZ09 502 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ZBTB1Q9Y2K1 713 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 LEMD3Q9Y2U8 911 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 KIF1AQ12756 1690 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 YY1P25490 414 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 BCAMP50895 628 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 RAD9BQ6WBX8 426 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NCCRP1Q6ZVX7 275 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 CACNA2D3Q8IZS8 1091 aa13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 SYMPKQ92797 1274 aaKnown RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 ZNF512BQ96KM6 892 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NUP88Q99567 741 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 V9GY48 417 aaPredicted RBP13.4□□□□□ -0.26
SMARCA4-217ENST00000591595 NWD2Q9ULI1 1742 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 CYP7A1P22680 504 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 TRPC1P48995 793 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 SARSP49591 514 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 RNF220Q5VTB9 566 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 MAEAQ7L5Y9 396 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 VGLL2Q8N8G2 317 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 RABL2BQ9UNT1 228 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 CTNND2Q9UQB3 1225 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 SPEF2Q9C093 1822 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 TNKSO95271 1327 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 A0A1B0GTH6 734 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 PPIP5K2O43314 1243 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 ABL1P00519 1130 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 KRT2P35908 639 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 AMPD2Q01433 879 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 NANOGNBQ7Z5D8 188 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 ZNF579Q8NAF0 562 aaKnown RBP13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 CXorf38Q8TB03 319 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 CCT6BQ92526 530 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 ESR2Q92731 530 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 SEC16BQ96JE7 1060 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 MED15Q96RN5 788 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 CTAGE1Q96RT6 745 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 POLR3CQ9BUI4 534 aaPredicted RBP13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 VPS16Q9H269 839 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 BLZF1Q9H2G9 400 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 TACC3Q9Y6A5 838 aa13.39□□□□□ -0.27
SMARCA4-217ENST00000591595 HARSP12081 509 aaKnown RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 RRAGBQ5VZM2 374 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 SEPT14Q6ZU15 432 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 CEP128Q6ZU80 1094 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 CCDC65Q8IXS2 484 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 OXCT2Q9BYC2 517 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 TRPM3Q9HCF6 1732 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 MST1RQ04912 1400 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 GNAT2P19087 354 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 PPARAQ07869 468 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 NT5DC1Q5TFE4 455 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 TBC1D1Q86TI0 1168 aaPredicted RBP13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 SAMD3Q8N6K7 520 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 PAGE5Q96GU1 130 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 PANX2Q96RD6 677 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 MROH5Q6ZUA9 1318 aa13.38□□□□□ -0.27
SMARCA4-217ENST00000591595 FLOT1O75955 427 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms