RNA–Protein interactions for RNA: ENST00000590922.1

GFAP-217, Transcript of glial fibrillary acidic protein, humanhuman

TSL 2

Gene GFAP, Length 556 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-217ENST00000590922 CCDC69A6NI79 296 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 A6NJR5 290 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 PI4K2BG5E9Z4 385 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 CYTH3O43739 400 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 DDAH1O94760 285 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 LIFRP42702 1097 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 KRT32Q14532 448 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 DHX32Q7L7V1 743 aaKnown RBP12.71□□□□□ -0.37
GFAP-217ENST00000590922 SPRED2Q7Z698 418 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 TMTC2Q8N394 836 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 CCDC155Q8N6L0 562 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 GDPD5Q8WTR4 605 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 SCFD2Q8WU76 684 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 PPP1R13LQ8WUF5 828 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 MTMR8Q96EF0 704 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 JAKMIP1Q96N16 626 aaKnown RBP12.71□□□□□ -0.37
GFAP-217ENST00000590922 MPHOSPH6Q99547 160 aaKnown RBP12.71□□□□□ -0.37
GFAP-217ENST00000590922 ZBED2Q9BTP6 218 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 USP26Q9BXU7 913 aa12.71□□□□□ -0.37
GFAP-217ENST00000590922 LCHNA4D1U4 455 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 PPP1R11O60927 126 aaPredicted RBP12.7□□□□□ -0.38
GFAP-217ENST00000590922 CALML3P27482 149 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 WDR5P61964 334 aaKnown RBP12.7□□□□□ -0.38
GFAP-217ENST00000590922 PDE4DQ08499 809 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 PTGISQ16647 500 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 SLC30A10Q6XR72 485 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 HOMER1Q86YM7 354 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 CAGE1Q8TC20 777 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 AFAP1L1Q8TED9 768 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 PIBF1Q8WXW3 757 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 TBC1D5Q92609 795 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 PIGSQ96S52 555 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 RIOX1Q9H6W3 641 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 CD320Q9NPF0 282 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 PNMA2Q9UL42 364 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 SLC12A7Q9Y666 1083 aa12.7□□□□□ -0.38
GFAP-217ENST00000590922 ZBTB5O15062 677 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 PLEKHA8P1O95397 391 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 TXNP10599 105 aaKnown RBP12.69□□□□□ -0.38
GFAP-217ENST00000590922 EDNRBP24530 442 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 CHMP4BP1P59074 171 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 RPS6P62753 249 aaKnown RBP12.69□□□□□ -0.38
GFAP-217ENST00000590922 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 SGMS1Q86VZ5 419 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 CMTR1Q8N1G2 835 aaKnown RBP12.69□□□□□ -0.38
GFAP-217ENST00000590922 DNERQ8NFT8 737 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 CTCFLQ8NI51 663 aaPredicted RBP12.69□□□□□ -0.38
GFAP-217ENST00000590922 COPS5Q92905 334 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 MAP3K14Q99558 947 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 UBE2ZQ9H832 354 aaPredicted RBP12.69□□□□□ -0.38
GFAP-217ENST00000590922 BRPF3Q9ULD4 1205 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 SIP14410 1827 aa12.69□□□□□ -0.38
GFAP-217ENST00000590922 ABCB11O95342 1321 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 PRR33A8MZF0 331 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 B4DLN1 442 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 EPB41L2O43491 1005 aaKnown RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 PARNO95453 639 aaKnown RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 HMGB1P09429 215 aaKnown RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 SELPP16109 830 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 KIF5BP33176 963 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 MRPL12P52815 198 aaKnown RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 DEFB103AP81534 67 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 CNKSR3Q6P9H4 555 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 APOA5Q6Q788 366 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 BLOC1S2Q6QNY1 142 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 TMCO2Q7Z6W1 182 aaPredicted RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 MICU3Q86XE3 530 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 FAM178BQ8IXR5 827 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
GFAP-217ENST00000590922 CTAGE1Q96RT6 745 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 RAD9AQ99638 391 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 AMNQ9BXJ7 453 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 SUGCTQ9HAC7 445 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 MTUS1Q9ULD2 1270 aa12.68□□□□□ -0.38
GFAP-217ENST00000590922 PNMA6FA0A0J9YX94 578 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 ABHD14A-ACY1A0A1B0GW23 586 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 OPLAHO14841 1288 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 GJB5O95377 273 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 CALM1P0DP23 149 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 CALM2P0DP24 149 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 CALM3P0DP25 149 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 CASTP20810 708 aaKnown RBP12.67□□□□□ -0.38
GFAP-217ENST00000590922 ERVK-21P61565 698 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 GPNMBQ14956 572 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 LEXMQ3ZCV2 418 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 GDF6Q6KF10 455 aaPredicted RBP12.67□□□□□ -0.38
GFAP-217ENST00000590922 Q6ZUG5 572 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 LRRC8DQ7L1W4 858 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 ALYREFQ86V81 257 aaKnown RBP12.67□□□□□ -0.38
GFAP-217ENST00000590922 SESTD1Q86VW0 696 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 GJD3Q8N144 294 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 SRBD1Q8N5C6 995 aaKnown RBP12.67□□□□□ -0.38
GFAP-217ENST00000590922 FANCBQ8NB91 859 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 RGS22Q8NE09 1264 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 MRPL11Q9Y3B7 192 aaKnown RBP12.67□□□□□ -0.38
GFAP-217ENST00000590922 PCDHA1Q9Y5I3 950 aa12.67□□□□□ -0.38
GFAP-217ENST00000590922 KLF18A0A0U1RQI7 1052 aa12.66□□□□□ -0.38
GFAP-217ENST00000590922 LINC01553A4QN01 128 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms