RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 DAGLBQ8NCG7 672 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 RNF217Q8TC41 542 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 ACER1Q8TDN7 264 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PHKBQ93100 1093 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 OPTNQ96CV9 577 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 ZMYND12Q9H0C1 365 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PSTPIP2Q9H939 334 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 ZNF408Q9H9D4 720 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 JMJD4Q9H9V9 463 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 CYLDQ9NQC7 956 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PPP1R9AQ9ULJ8 1098 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PCDHA4Q9UN74 947 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 AGTPBP1Q9UPW5 1226 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 PCDHA1Q9Y5I3 950 aa8.37□□□□□ -1.07
SMAD4-210ENST00000590061 TRPM7Q96QT4 1865 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 ATAD5Q96QE3 1844 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 CCDC194A0A1B0GVG4 234 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 TMEM88BA6NKF7 163 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 UBE2Q2LH0YL09 131 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 LAD1O00515 517 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PLEKHA8P1O95397 391 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 SLC25A27O95847 323 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 ICAM1P05362 532 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 FDPSP14324 419 aaKnown RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 VCAM1P19320 739 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 ECE1P42892 770 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PTGIRP43119 386 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 HMGCS2P54868 508 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 HUNKP57058 714 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 MCCD1P59942 119 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 ERVK-9P63128 1117 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 HTRA3P83110 453 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 INSM1Q01101 510 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PTSQ03393 145 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 AP3B2Q13367 1082 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 IRF5Q13568 498 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PRKG1Q13976 671 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 RRP1BQ14684 758 aaKnown RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 CDC37Q16543 378 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 FAM83BQ5T0W9 1011 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PRAMEF18Q5VWM3 479 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 KRT40Q6A162 431 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 LBX2Q6XYB7 198 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 CATSPERGQ6ZRH7 1159 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 KCTD1Q719H9 257 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 NOSTRINQ8IVI9 506 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 REXO1Q8N1G1 1221 aaKnown RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 STAG2Q8N3U4 1231 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 CCDC34Q96HJ3 373 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PHF20Q9BVI0 1012 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 RANBP17Q9H2T7 1088 aaKnown RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 RPAP3Q9H6T3 665 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 ELP3Q9H9T3 547 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 SLC38A10Q9HBR0 1119 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 VAT1LQ9HCJ6 419 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 RIC8AQ9NPQ8 531 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 PRR12Q9ULL5 1215 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 MTMR6Q9Y217 621 aa8.36□□□□□ -1.07
SMAD4-210ENST00000590061 MORC2Q9Y6X9 1032 aaPredicted RBP8.36□□□□□ -1.07
SMAD4-210ENST00000590061 FRMPD2Q68DX3 1309 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 LOC102724159A0A0B4J2E5 919 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 SMCO2A6NFE2 343 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 FIGNL2A6NMB9 653 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 PIK3CDO00329 1044 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 GOLGA8HP0CJ92 632 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 GCFC2P16383 781 aaKnown RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 ZNF157P51786 506 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 PWP2Q15269 919 aaKnown RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 COL13A1Q5TAT6 717 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 RGMBQ6NW40 437 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 XRRA1Q6P2D8 792 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 ANKRD23Q86SG2 305 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 HOMER1Q86YM7 354 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 DIS3L2Q8IYB7 885 aaKnown RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 BLIDQ8IZY5 108 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 SPICE1Q8N0Z3 855 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 CHST13Q8NET6 341 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 KCNG4Q8TDN1 519 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 WNK4Q96J92 1243 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 PIGSQ96S52 555 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 PARK7Q99497 189 aaKnown RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 PYM1Q9BRP8 204 aaKnown RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 TEX13BQ9BXU2 312 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 UBA5Q9GZZ9 404 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 ZNF395Q9H8N7 513 aaPredicted RBP8.35□□□□□ -1.07
SMAD4-210ENST00000590061 ADAMTS5Q9UNA0 930 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 SSC5DA1L4H1 1573 aa8.35□□□□□ -1.07
SMAD4-210ENST00000590061 PASKQ96RG2 1323 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 SPDYE3A6NKU9 549 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 GCOM1H8Y6P7 765 aaPredicted RBP8.34□□□□□ -1.07
SMAD4-210ENST00000590061 STXBP3O00186 592 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 VWA5AO00534 786 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 CYTH3O43739 400 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 YEATS4O95619 227 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 POLR2MP0CAP2 368 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 USP11P51784 963 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 JAG1P78504 1218 aa8.34□□□□□ -1.07
SMAD4-210ENST00000590061 KIF23Q02241 960 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms