RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	ITGB5	P18084	799 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	MDM2	Q00987	491 aa	Predicted RBP	19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	STK3	Q13188	491 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	CELF3	Q5SZQ8	465 aa	Known RBP	19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	VTI1A	Q96AJ9	217 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	SLC26A6	Q9BXS9	759 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	POLR3E	Q9NVU0	708 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	UBIAD1	Q9Y5Z9	338 aa		19.87	■□□□□ 0.77
MBD1-221	ENST00000589867	ESYT2	A0FGR8	921 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	STAM2	O75886	525 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	LARGE1	O95461	756 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	GGPS1	O95749	300 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	TGFB3	P10600	412 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	ADCY7	P51828	1080 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	HSDL1	Q3SXM5	330 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	XRRA1	Q6P2D8	792 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	CRYGN	Q8WXF5	182 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	MTG1	Q9BT17	334 aa	Predicted RBP	19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	ZMYND12	Q9H0C1	365 aa		19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	PRDM5	Q9NQX1	630 aa	Predicted RBP	19.86	■□□□□ 0.77
MBD1-221	ENST00000589867	EDIL3	O43854	480 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	PFKFB2	O60825	505 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	CTDNEP1	O95476	244 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	KCNV1	Q6PIU1	500 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	TEX2	Q8IWB9	1127 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	PPTC7	Q8NI37	304 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	BAD	Q92934	168 aa		19.85	■□□□□ 0.77
MBD1-221	ENST00000589867	DCDC2C	A8MYV0	355 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	B4GALT4	O60513	344 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	ATP9A	O75110	1047 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	ST3GAL1	Q11201	340 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	LAMC2	Q13753	1193 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	NPY5R	Q15761	445 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	NBPF20	Q3BBV1	942 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	DHX37	Q8IY37	1157 aa	Known RBP	19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	CYP2W1	Q8TAV3	490 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	AIFM3	Q96NN9	605 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	ANO3	Q9BYT9	981 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	TRPV6	Q9H1D0	765 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	TMEM39A	Q9NV64	488 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	VPS54	Q9P1Q0	977 aa		19.84	■□□□□ 0.77
MBD1-221	ENST00000589867	MROH7	Q68CQ1	1323 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	SPDYE3	A6NKU9	549 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	FIBP	O43427	364 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	KPNA6	O60684	536 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	KCNA2	P16389	499 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	SREBF1	P36956	1147 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	EPHB4	P54760	987 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	ME3	Q16798	604 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	JAKMIP3	Q5VZ66	844 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	CTAGE1	Q96RT6	745 aa		19.83	■□□□□ 0.77
MBD1-221	ENST00000589867	HAS3	O00219	553 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	EIF5B	O60841	1220 aa	Known RBP	19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	FXR1	P51114	621 aa	Known RBP eCLIP	19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	NEK4	P51957	841 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	AP3B2	Q13367	1082 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	GNPTAB	Q3T906	1256 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	RASGRP4	Q8TDF6	673 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	GPRASP2	Q96D09	838 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	SPATA33	Q96N06	139 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	SENP7	Q9BQF6	1050 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	JADE2	Q9NQC1	790 aa		19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	TRMT13	Q9NUP7	481 aa	Known RBP	19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	TRIP12	Q14669	1992 aa	Predicted RBP	19.82	■□□□□ 0.76
MBD1-221	ENST00000589867	UMODL1	Q5DID0	1318 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	F2	P00734	622 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	FOS	P01100	380 aa	Predicted RBP	19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	ZNF286B	P0CG31	522 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	SSRP1	Q08945	709 aa	Known RBP	19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	DGKD	Q16760	1214 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	BRDT	Q58F21	947 aa	Predicted RBP	19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	METTL7B	Q6UX53	244 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	CYFIP1	Q7L576	1253 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	NECAB1	Q8N987	351 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	C16orf70	Q9BSU1	422 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	SLK	Q9H2G2	1235 aa	Predicted RBP	19.81	■□□□□ 0.76
MBD1-221	ENST00000589867	PRKAG2	Q9UGJ0	569 aa		19.81	■□□□□ 0.76
MBD1-221	ENST00000589867		A0A1W2PPC1	479 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867		M0R2N6	131 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	PPFIA4	O75335	1185 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	TIMP1	P01033	207 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	AKAP17A	Q02040	695 aa	Known RBP	19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	HIC1	Q14526	733 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	NFRKB	Q6P4R8	1299 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	VWCE	Q96DN2	955 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	GPR20	Q99678	358 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	MXRA8	Q9BRK3	442 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	SEZ6L	Q9BYH1	1024 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	UBE2O	Q9C0C9	1292 aa	Known RBP	19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	GLT8D2	Q9H1C3	349 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	SH3GLB2	Q9NR46	395 aa		19.8	■□□□□ 0.76
MBD1-221	ENST00000589867	SOX1	O00570	391 aa	Predicted RBP	19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	CPLX1	O14810	134 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	DEXI	O95424	95 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	AR	P10275	920 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	FDPS	P14324	419 aa	Known RBP	19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	RBM25	P49756	843 aa	Known RBP	19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	ARHGAP4	P98171	946 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	NEDD9	Q14511	834 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	ANKRD1	Q15327	319 aa		19.79	■□□□□ 0.76

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms