RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 DDX4Q9NQI0 724 aaKnown RBP16.05■□□□□ 0.16
RETREG3-208ENST00000589797 TACC3Q9Y6A5 838 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 ATP2C2O75185 946 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 TNNI1P19237 187 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 SND1Q7KZF4 910 aaKnown RBP eCLIP16.05■□□□□ 0.16
RETREG3-208ENST00000589797 CCDC50Q8IVM0 306 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 LARSQ9P2J5 1176 aaKnown RBP16.05■□□□□ 0.16
RETREG3-208ENST00000589797 HDAC6Q9UBN7 1215 aa16.05■□□□□ 0.16
RETREG3-208ENST00000589797 KCNK3O14649 394 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 CYTH3O43739 400 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 FTCDO95954 541 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 ECE1P42892 770 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 VAV2P52735 878 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 TEKT3Q9BXF9 490 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 HAUS4Q9H6D7 363 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 AGPAT5Q9NUQ2 364 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 TRIM10Q9UDY6 481 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 SLC37A4O43826 429 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 MOCS3O95396 460 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 KLK7P49862 253 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 GUCY2FP51841 1108 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 GADL1Q6ZQY3 521 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 STK17AQ9UEE5 414 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 SPATA31A6Q5VVP1 1343 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 MED1Q15648 1581 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-208ENST00000589797 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
RETREG3-208ENST00000589797 SPOPO43791 374 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 MAN2A1Q16706 1144 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 NCAPG2Q86XI2 1143 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 SPZ1Q9BXG8 430 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 CUEDC2Q9H467 287 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 RSPH14Q9UHP6 348 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 HPSEQ9Y251 543 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 SRGNP10124 158 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 STAT1P42224 750 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 ACER1Q8TDN7 264 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 ZNF668Q96K58 619 aaPredicted RBP16.04■□□□□ 0.16
RETREG3-208ENST00000589797 ABHD10Q9NUJ1 306 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 CDC23Q9UJX2 597 aa16.04■□□□□ 0.16
RETREG3-208ENST00000589797 MYMKA6NI61 221 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 HSF2BPO75031 334 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 GCFC2P16383 781 aaKnown RBP16.03■□□□□ 0.16
RETREG3-208ENST00000589797 NF2P35240 595 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
RETREG3-208ENST00000589797 CCDC155Q8N6L0 562 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 DYDC1Q8WWB3 177 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 BPIFA3Q9BQP9 254 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.03■□□□□ 0.16
RETREG3-208ENST00000589797 PPP4CP60510 307 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 SEPT14Q6ZU15 432 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 PEX26Q7Z412 305 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 DALRD3Q5D0E6 543 aaKnown RBP16.03■□□□□ 0.16
RETREG3-208ENST00000589797 IMPG2Q9BZV3 1241 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 ABCB11O95342 1321 aa16.03■□□□□ 0.16
RETREG3-208ENST00000589797 NCAPHQ15003 741 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 HDXQ7Z353 690 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 IFT74Q96LB3 600 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 USTQ9Y2C2 406 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 ZHX2Q9Y6X8 837 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 ANKRD62A6NC57 917 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 GFPT2O94808 682 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 OAS2P29728 719 aaKnown RBP16.02■□□□□ 0.16
RETREG3-208ENST00000589797 GYS2P54840 703 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 RPS6KA1Q15418 735 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 DAAM2Q86T65 1068 aa16.02■□□□□ 0.16
RETREG3-208ENST00000589797 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 EFCAB8A8MWE9 144 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 HPDP32754 393 aaPredicted RBP16.02■□□□□ 0.15
RETREG3-208ENST00000589797 CETN2P41208 172 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 RASA3Q14644 834 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 GBP6Q6ZN66 633 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 RBM43Q6ZSC3 357 aaKnown RBP16.02■□□□□ 0.15
RETREG3-208ENST00000589797 UNC13DQ70J99 1090 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 METTL13Q8N6R0 699 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 PPP1R16BQ96T49 567 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 TSGA10Q9BZW7 698 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 TAOK3Q9H2K8 898 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 PIM2Q9P1W9 311 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.02■□□□□ 0.15
RETREG3-208ENST00000589797 ADGRG1Q9Y653 693 aa16.02■□□□□ 0.15
RETREG3-208ENST00000589797 NALCNQ8IZF0 1738 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
RETREG3-208ENST00000589797 COASYQ13057 564 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 SMC1AQ14683 1233 aaKnown RBP16.01■□□□□ 0.15
RETREG3-208ENST00000589797 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 USP37Q86T82 979 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 KSR1Q8IVT5 923 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 TC2NQ8N9U0 490 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 DYDC2Q96IM9 177 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 PARD6BQ9BYG5 372 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 LGALS16A8MUM7 142 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 ASNSP08243 561 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 CLCN6P51797 869 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 SLC7A5Q01650 507 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 STRIP1Q5VSL9 837 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 RAD9BQ6WBX8 426 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 SAMD7Q7Z3H4 446 aa16.01■□□□□ 0.15
RETREG3-208ENST00000589797 FAM186BQ8IYM0 893 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms