RNA–Protein interactions for RNA: ENST00000589614.5

TREM1-204, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TREM1, Length 772 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-204ENST00000589614 ADAM15Q13444 863 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 MBTPS1Q14703 1052 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 PPP2R5BQ15173 497 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 TRAF7Q6Q0C0 670 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 SMRP1Q8NCR6 262 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 TOP1MTQ969P6 601 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 CLIP2Q9UDT6 1046 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 NOP58Q9Y2X3 529 aaKnown RBP11.27□□□□□ -0.61
TREM1-204ENST00000589614 MYO10Q9HD67 2058 aa11.27□□□□□ -0.61
TREM1-204ENST00000589614 IGKV6D-41A0A0C4DH26 115 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 BMP3P12645 472 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 ALAS1P13196 640 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 RASA1P20936 1047 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 ALDH5A1P51649 535 aaPredicted RBP11.26□□□□□ -0.61
TREM1-204ENST00000589614 SLFN5Q08AF3 891 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 COASYQ13057 564 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 PTK7Q13308 1070 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 DGLUCYQ7Z3D6 616 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 FAM160B2Q86V87 743 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 DBF4BQ8NFT6 615 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 SCFD2Q8WU76 684 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 CHURC1Q8WUH1 139 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 RIPOR3Q96MK2 946 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 C11orf84Q9BUA3 381 aaPredicted RBP11.26□□□□□ -0.61
TREM1-204ENST00000589614 RWDD3Q9Y3V2 267 aa11.26□□□□□ -0.61
TREM1-204ENST00000589614 USP24Q9UPU5 2620 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 OTOGLQ3ZCN5 2332 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 TMEM232C9JQI7 657 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 PLA2G6O60733 806 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 MBD4O95243 580 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 NDUFV1P49821 464 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 RRP1P56182 461 aaKnown RBP11.25□□□□□ -0.61
TREM1-204ENST00000589614 PTPN21Q16825 1174 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 TRIM71Q2Q1W2 868 aaKnown RBP11.25□□□□□ -0.61
TREM1-204ENST00000589614 PLEKHG4Q58EX7 1191 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 MUM1L1Q5H9M0 696 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 CTR9Q6PD62 1173 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 PPP2R3CQ969Q6 453 aa11.25□□□□□ -0.61
TREM1-204ENST00000589614 PHF7Q9BWX1 381 aaPredicted RBP11.25□□□□□ -0.61
TREM1-204ENST00000589614 ARPP21Q9UBL0 812 aaPredicted RBP11.25□□□□□ -0.61
TREM1-204ENST00000589614 FAM208BQ5VWN6 2430 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 GRM6O15303 877 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 LINC01565O15544 149 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
TREM1-204ENST00000589614 ATP8B2P98198 1209 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 PUM1Q14671 1186 aaKnown RBP eCLIP11.24□□□□□ -0.61
TREM1-204ENST00000589614 ZNF618Q5T7W0 954 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 NSMFQ6X4W1 530 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 FRMD5Q7Z6J6 570 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
TREM1-204ENST00000589614 STAG1Q8WVM7 1258 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 KAT2BQ92831 832 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 RMDN1Q96DB5 314 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 CNTNAP3BQ96NU0 1288 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 PURBQ96QR8 312 aaKnown RBP11.24□□□□□ -0.61
TREM1-204ENST00000589614 MPHOSPH6Q99547 160 aaKnown RBP11.24□□□□□ -0.61
TREM1-204ENST00000589614 CNTNAP3Q9BZ76 1288 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 MKNK2Q9HBH9 465 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 CLEC1BQ9P126 229 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 KIAA1217Q5T5P2 1943 aa11.24□□□□□ -0.61
TREM1-204ENST00000589614 ANKRD11Q6UB99 2663 aaPredicted RBP11.24□□□□□ -0.61
TREM1-204ENST00000589614 TTLL1O95922 423 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 PDGFBP01127 241 aaPredicted RBP11.23□□□□□ -0.61
TREM1-204ENST00000589614 MMP1P03956 469 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 LINC00271P0C7V0 271 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 TXNP10599 105 aaKnown RBP11.23□□□□□ -0.61
TREM1-204ENST00000589614 EDNRBP24530 442 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 CTNNB1P35222 781 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 GTF2F1P35269 517 aaKnown RBP eCLIP11.23□□□□□ -0.61
TREM1-204ENST00000589614 ADD2P35612 726 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 BMPR1AP36894 532 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 CHMP4BP1P59074 171 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 SLFN13Q68D06 897 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 FIBCD1Q8N539 461 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 EFHBQ8N7U6 833 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 C7orf31Q8N865 590 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 COPS5Q92905 334 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 CEP95Q96GE4 821 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 GMCL1Q96IK5 515 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 IGFLR1Q9H665 355 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 MTMR4Q9NYA4 1195 aa11.23□□□□□ -0.61
TREM1-204ENST00000589614 USP15Q9Y4E8 981 aaPredicted RBP11.23□□□□□ -0.61
TREM1-204ENST00000589614 MYH7BA7E2Y1 1941 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 GOLIM4O00461 696 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 MMP3P08254 477 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 CASTP20810 708 aaKnown RBP11.22□□□□□ -0.61
TREM1-204ENST00000589614 PDE4BQ07343 736 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 BAATQ14032 418 aaPredicted RBP11.22□□□□□ -0.61
TREM1-204ENST00000589614 SBK1Q52WX2 424 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 TMEM105Q8N8V8 129 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 CLP1Q92989 425 aaKnown RBP11.22□□□□□ -0.61
TREM1-204ENST00000589614 IL17RAQ96F46 866 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 RPGRIP1Q96KN7 1286 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 KATNAL1Q9BW62 490 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 INCENPQ9NQS7 918 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 HDAC6Q9UBN7 1215 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 SLC4A4Q9Y6R1 1079 aa11.22□□□□□ -0.61
TREM1-204ENST00000589614 RSPH10B2B2RC85 870 aa11.21□□□□□ -0.61
TREM1-204ENST00000589614 UPP2O95045 317 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms