RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 FOXD4L5Q5VV16 416 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 FBXO16Q8IX29 292 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 TRPV1Q8NER1 839 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 FOXD4L4Q8WXT5 416 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 LENG9Q96B70 501 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 ZFP91Q96JP5 570 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 FAM20AQ96MK3 541 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 ZNF396Q96N95 335 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 HMX1Q9NP08 348 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 PDGFCQ9NRA1 345 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 DDX41Q9UJV9 622 aaKnown RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 ZHX1Q9UKY1 873 aaPredicted RBP13.8□□□□□ -0.2
DNMT1-218ENST00000589294 Q9Y3F1 56 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 MRVI1Q9Y6F6 885 aa13.8□□□□□ -0.2
DNMT1-218ENST00000589294 LAD1O00515 517 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 SEPT4O43236 478 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 BAG4O95429 457 aaKnown RBP13.79□□□□□ -0.2
DNMT1-218ENST00000589294 BMP15O95972 392 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 ARP10275 920 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 TXNP10599 105 aaKnown RBP13.79□□□□□ -0.2
DNMT1-218ENST00000589294 AKR1A1P14550 325 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 TNFAIP2Q03169 654 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 NEDD9Q14511 834 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 DUSP28Q4G0W2 176 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 SH3TC2Q8TF17 1288 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 ARMC5Q96C12 935 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 AGO4Q9HCK5 861 aaKnown RBP13.79□□□□□ -0.2
DNMT1-218ENST00000589294 TBC1D22BQ9NU19 505 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 CFAP45Q9UL16 551 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 CEP131Q9UPN4 1083 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 PCDHB6Q9Y5E3 794 aa13.79□□□□□ -0.2
DNMT1-218ENST00000589294 MYH7BA7E2Y1 1941 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 IPO5O00410 1097 aaKnown RBP13.78□□□□□ -0.2
DNMT1-218ENST00000589294 MSH4O15457 936 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 SLC37A4O43826 429 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 NEMFO60524 1076 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 MSCO60682 206 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 MCM7P33993 719 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 SEMA3FQ13275 785 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 FAM173BQ6P4H8 233 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 SLFN12Q8IYM2 578 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 C4orf32Q8N8J7 132 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 SLC5A5Q92911 643 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 MTMR9Q96QG7 549 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 RIT2Q99578 217 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 ZNF577Q9BSK1 485 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 KCNMB3Q9NPA1 279 aa13.78□□□□□ -0.2
DNMT1-218ENST00000589294 WNT7AO00755 349 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 MARCH6O60337 910 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 ATP9AO75110 1047 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 DUSP11O75319 330 aaKnown RBP13.77□□□□□ -0.21
DNMT1-218ENST00000589294 NFASCO94856 1347 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 KCNA2P16389 499 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 SMPD1P17405 629 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 CNGA1P29973 690 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 CCND3P30281 292 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-218ENST00000589294 ADCYAP1R1P41586 468 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 SP2Q02086 613 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 PTGDRQ13258 359 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 LAMC2Q13753 1193 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 CALCRLQ16602 461 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 LY6KQ17RY6 165 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 ANO1Q5XXA6 986 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 ETNPPLQ8TBG4 499 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 HAS1Q92839 578 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 EMID1Q96A84 441 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-218ENST00000589294 SDF4Q9BRK5 362 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 POLR3EQ9NVU0 708 aa13.77□□□□□ -0.21
DNMT1-218ENST00000589294 GNEQ9Y223 722 aaKnown RBP13.77□□□□□ -0.21
DNMT1-218ENST00000589294 MORC2Q9Y6X9 1032 aaPredicted RBP13.77□□□□□ -0.21
DNMT1-218ENST00000589294 HTTP42858 3142 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 DHX15O43143 795 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 ARIH2O95376 493 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 GH1P01241 217 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 RARBP10826 455 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 CAPN2P17655 700 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 PRPHP41219 470 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 NBR1Q14596 966 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 SF3A1Q15459 793 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 CELF3Q5SZQ8 465 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 ARL6IP4Q66PJ3 421 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 METTL7BQ6UX53 244 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 POTEDQ86YR6 584 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 DHX37Q8IY37 1157 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 ZNF333Q96JL9 665 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 MCOLN1Q9GZU1 580 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 MLXIPQ9HAP2 919 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 TFIP11Q9UBB9 837 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
DNMT1-218ENST00000589294 PCDHA12Q9UN75 941 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 MCM3APO60318 1980 aa13.76□□□□□ -0.21
DNMT1-218ENST00000589294 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 PSMD10O75832 226 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 GGPS1O95749 300 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 OR52Z1P0C646 297 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 CCL5P13501 91 aa13.75□□□□□ -0.21
DNMT1-218ENST00000589294 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
DNMT1-218ENST00000589294 NASPP49321 788 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms