RNA–Protein interactions for RNA: ENST00000589293.5

LINC01539-202, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-202ENST00000589293 KIAA1683Q9H0B3 1180 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 CCDC8Q9H0W5 538 aaPredicted RBP6.75□□□□□ -1.33
LINC01539-202ENST00000589293 BCL11AQ9H165 835 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 EHD4Q9H223 541 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 RPAP3Q9H6T3 665 aaPredicted RBP6.75□□□□□ -1.33
LINC01539-202ENST00000589293 C11orf16Q9NQ32 467 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 MTMR10Q9NXD2 777 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 FAM13BQ9NYF5 915 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 FOXD3Q9UJU5 478 aaPredicted RBP6.75□□□□□ -1.33
LINC01539-202ENST00000589293 ATP11BQ9Y2G3 1177 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 DDX60LQ5H9U9 1706 aaKnown RBP6.75□□□□□ -1.33
LINC01539-202ENST00000589293 PFASO15067 1338 aa6.75□□□□□ -1.33
LINC01539-202ENST00000589293 NDUFB5O43674 189 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 PEX10O60683 326 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 COL6A1P12109 1028 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 VCAM1P19320 739 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 ATP8B2P98198 1209 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 DSC3Q14574 896 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 COG2Q14746 738 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 C8orf34Q49A92 452 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 TATDN1Q6P1N9 297 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 ADGRA1Q86SQ6 560 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 AACSQ86V21 672 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 METTL16Q86W50 562 aaKnown RBP6.74□□□□□ -1.33
LINC01539-202ENST00000589293 NCAPG2Q86XI2 1143 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 PHF6Q8IWS0 365 aaKnown RBP eCLIP6.74□□□□□ -1.33
LINC01539-202ENST00000589293 TMEM57Q8N5G2 664 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 MB21D1Q8N884 522 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 USP6NLQ92738 828 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 C12orf42Q96LP6 360 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 FAM161BQ96MY7 647 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 ASB16Q96NS5 453 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 DNAJC18Q9H819 358 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 PIH1D3Q9NQM4 214 aaKnown RBP6.74□□□□□ -1.33
LINC01539-202ENST00000589293 MCM9Q9NXL9 1143 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 CTDP1Q9Y5B0 961 aaPredicted RBP6.74□□□□□ -1.33
LINC01539-202ENST00000589293 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.74□□□□□ -1.33
LINC01539-202ENST00000589293 MAST2Q6P0Q8 1798 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 DOCK3Q8IZD9 2030 aa6.74□□□□□ -1.33
LINC01539-202ENST00000589293 CCER2I3L3R5 266 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 WIPF1O43516 503 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 TNFRSF21O75509 655 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 FLOT1O75955 427 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 HOXC6P09630 235 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 IFIT2P09913 472 aaKnown RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 ARAFP10398 606 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 FCER1AP12319 257 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 ADORA2AP29274 412 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 CYP2C19P33261 490 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 MFAP1P55081 439 aaKnown RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 RTP1P59025 263 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 ORC1Q13415 861 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 GRB14Q14449 540 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 GJC2Q5T442 439 aaPredicted RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 TMCO4Q5TGY1 634 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 FAM109BQ6ICB4 259 aaPredicted RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 PDE12Q6L8Q7 609 aaKnown RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 RNF180Q86T96 592 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 NPAS4Q8IUM7 802 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 CLASRPQ8N2M8 674 aaKnown RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 SSH3Q8TE77 659 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 MROH8Q9H579 483 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 SWAP70Q9UH65 585 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 DBNLQ9UJU6 430 aaKnown RBP6.73□□□□□ -1.33
LINC01539-202ENST00000589293 NAGPAQ9UK23 515 aa6.73□□□□□ -1.33
LINC01539-202ENST00000589293 SEPT4O43236 478 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 TREHO43280 583 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 SIN3BO75182 1162 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 HMMRO75330 724 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 MAP3K6O95382 1288 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 SLC25A27O95847 323 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 RARAP10276 462 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 RARBP10826 455 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 ERCC3P19447 782 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 COPB2P35606 906 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 MAP2K3P46734 347 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 JAG1P78504 1218 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 KCTD2Q14681 263 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 SEPT2Q15019 361 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 SHROOM1Q2M3G4 852 aaPredicted RBP6.72□□□□□ -1.33
LINC01539-202ENST00000589293 OLFML2BQ68BL8 750 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 CCDC174Q6PII3 467 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 LYPD4Q6UWN0 246 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 LBX2Q6XYB7 198 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 TMEM179Q6ZVK1 233 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 ZNF438Q7Z4V0 828 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 SHCBP1Q8NEM2 672 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 ACER1Q8TDN7 264 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 TNFRSF25Q93038 417 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 CITED4Q96RK1 184 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
LINC01539-202ENST00000589293 MOV10L1Q9BXT6 1211 aaKnown RBP6.72□□□□□ -1.33
LINC01539-202ENST00000589293 OXCT2Q9BYC2 517 aaPredicted RBP6.72□□□□□ -1.33
LINC01539-202ENST00000589293 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.72□□□□□ -1.33
LINC01539-202ENST00000589293 SPATC1LQ9H0A9 340 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 AVENQ9NQS1 362 aaPredicted RBP6.72□□□□□ -1.33
LINC01539-202ENST00000589293 BTBD7Q9P203 1132 aa6.72□□□□□ -1.33
LINC01539-202ENST00000589293 CNPY2Q9Y2B0 182 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms