RNA–Protein interactions for RNA: ENST00000589174.1

MRPL54-202, Transcript of mitochondrial ribosomal protein L54, humanhuman

TSL 3

Gene MRPL54, Length 491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-202ENST00000589174 SELPP16109 830 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 UBA1P22314 1058 aaKnown RBP12.84□□□□□ -0.35
MRPL54-202ENST00000589174 MRPS9P82933 396 aaKnown RBP12.84□□□□□ -0.35
MRPL54-202ENST00000589174 BFSP2Q13515 415 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 MFSD10Q14728 455 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 KIAA0753Q2KHM9 967 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 ARHGEF16Q5VV41 709 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.84□□□□□ -0.35
MRPL54-202ENST00000589174 VSIG10LQ86VR7 867 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 RETREG2Q8NC44 543 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 PPTC7Q8NI37 304 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 CAGE1Q8TC20 777 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 GDPD5Q8WTR4 605 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 PIGSQ96S52 555 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 MAF1Q9H063 256 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 RWDD1Q9H446 243 aaPredicted RBP12.84□□□□□ -0.35
MRPL54-202ENST00000589174 RIOX1Q9H6W3 641 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 CD320Q9NPF0 282 aa12.84□□□□□ -0.35
MRPL54-202ENST00000589174 MRPL11Q9Y3B7 192 aaKnown RBP12.84□□□□□ -0.35
MRPL54-202ENST00000589174 ZBTB5O15062 677 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 BAIAP3O94812 1187 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 MYCLP12524 364 aaPredicted RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 ACTN1P12814 892 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 CASTP20810 708 aaKnown RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 MFAP1P55081 439 aaKnown RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 TROAPQ12815 778 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 GRM4Q14833 912 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 DGKDQ16760 1214 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 IMMTQ16891 758 aaKnown RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 BRDTQ58F21 947 aaPredicted RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 CELF3Q5SZQ8 465 aaKnown RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 IFIT1BQ5T764 474 aaKnown RBP12.83□□□□□ -0.36
MRPL54-202ENST00000589174 AMNQ9BXJ7 453 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 SUGCTQ9HAC7 445 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 MRVI1Q9Y6F6 885 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 FRMPD4Q14CM0 1322 aa12.83□□□□□ -0.36
MRPL54-202ENST00000589174 LINC01553A4QN01 128 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 DHX16O60231 1041 aaKnown RBP12.82□□□□□ -0.36
MRPL54-202ENST00000589174 LGR5O75473 907 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 GJB5O95377 273 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 GGPS1O95749 300 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 TTC22Q5TAA0 569 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 CNKSR3Q6P9H4 555 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 HOMER1Q86YM7 354 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 MCF2L2Q86YR7 1114 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 KRT23Q9C075 422 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 EPHX3Q9H6B9 360 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 C11orf16Q9NQ32 467 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 NOD1Q9Y239 953 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 SUPT16HQ9Y5B9 1047 aaKnown RBP12.82□□□□□ -0.36
MRPL54-202ENST00000589174 PCDHA1Q9Y5I3 950 aa12.82□□□□□ -0.36
MRPL54-202ENST00000589174 BDP1A6H8Y1 2624 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 MYO7AQ13402 2215 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 CHMLP26374 656 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 PTK7Q13308 1070 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 LAMC2Q13753 1193 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 CCDC178Q5BJE1 867 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 FAM117BQ6P1L5 589 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 SERINC5Q86VE9 423 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 TRIM50Q86XT4 487 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 DHX37Q8IY37 1157 aaKnown RBP12.81□□□□□ -0.36
MRPL54-202ENST00000589174 DBF4BQ8NFT6 615 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 YTHDC1Q96MU7 727 aaKnown RBP12.81□□□□□ -0.36
MRPL54-202ENST00000589174 MPHOSPH6Q99547 160 aaKnown RBP12.81□□□□□ -0.36
MRPL54-202ENST00000589174 MTUS1Q9ULD2 1270 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 LOXHD1Q8IVV2 1947 aa12.81□□□□□ -0.36
MRPL54-202ENST00000589174 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.8□□□□□ -0.36
MRPL54-202ENST00000589174 B4DLN1 442 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 TREHO43280 583 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 NT5C2P49902 561 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 MRPL12P52815 198 aaKnown RBP12.8□□□□□ -0.36
MRPL54-202ENST00000589174 ERVK-21P61565 698 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 ADAM17P78536 824 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 AAMPQ13685 434 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 FCHSD1Q86WN1 690 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 MB21D2Q8IYB1 491 aaPredicted RBP12.8□□□□□ -0.36
MRPL54-202ENST00000589174 C7orf31Q8N865 590 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 IGDCC4Q8TDY8 1250 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 SPATA33Q96N06 139 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 C17orf80Q9BSJ5 609 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 UBAC1Q9BSL1 405 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 RNPEPQ9H4A4 650 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 CNNM2Q9H8M5 875 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 KIAA1671Q9BY89 1806 aa12.8□□□□□ -0.36
MRPL54-202ENST00000589174 RALGAPA2Q2PPJ7 1873 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 ABHD14A-ACY1A0A1B0GW23 586 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 E7EWF7 191 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 HIP1O00291 1037 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 PPFIA4O75335 1185 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 LGALS2P05162 132 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 LINC00271P0C7V0 271 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 HTRA4P83105 476 aaPredicted RBP12.79□□□□□ -0.36
MRPL54-202ENST00000589174 SKIV2LQ15477 1246 aaKnown RBP12.79□□□□□ -0.36
MRPL54-202ENST00000589174 PLEKHG4Q58EX7 1191 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 SP7Q8TDD2 431 aaPredicted RBP12.79□□□□□ -0.36
MRPL54-202ENST00000589174 PIBF1Q8WXW3 757 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 INPP4AQ96PE3 977 aaPredicted RBP12.79□□□□□ -0.36
MRPL54-202ENST00000589174 CTNNA3Q9UI47 895 aa12.79□□□□□ -0.36
MRPL54-202ENST00000589174 KAT6AQ92794 2004 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms