RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 PANK1Q8TE04 598 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 MAML3Q96JK9 1138 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 MMP19Q99542 508 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 GPR108Q9NPR9 543 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 XPNPEP3Q9NQH7 507 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 MUC3AQ02505 3323 aa6.73□□□□□ -1.33
CHUK-203ENST00000588656 CHD9Q3L8U1 2897 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 MYH6P13533 1939 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 COL4A4P53420 1690 aaPredicted RBP6.72□□□□□ -1.33
CHUK-203ENST00000588656 A0A1W2PQ45 241 aaPredicted RBP6.72□□□□□ -1.33
CHUK-203ENST00000588656 A0A1W2PQY0 241 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 DCDC2BA2VCK2 349 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 C1QTNF9BB2RNN3 333 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 ADCY6O43306 1168 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 MSCO60682 206 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 MBD4O95243 580 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 CLTBP09497 229 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 HOXC6P09630 235 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 FURINP09958 794 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 ACRP10323 421 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 RAG1P15918 1043 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 CAPN2P17655 700 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 CD33P20138 364 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 GABPAQ06546 454 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 CCDC85BQ15834 202 aaPredicted RBP6.72□□□□□ -1.33
CHUK-203ENST00000588656 FAM83BQ5T0W9 1011 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 OLFML2BQ68BL8 750 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 SIAH1Q8IUQ4 282 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 ARRDC4Q8NCT1 418 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 CRNKL1Q9BZJ0 848 aaKnown RBP6.72□□□□□ -1.33
CHUK-203ENST00000588656 PPP1R12CQ9BZL4 782 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 EHD4Q9H223 541 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 BOLA2Q9H3K6 86 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 DCP1AQ9NPI6 582 aaPredicted RBP6.72□□□□□ -1.33
CHUK-203ENST00000588656 MARK1Q9P0L2 795 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 CHD7Q9P2D1 2997 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 KLF15Q9UIH9 416 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 ZHX1Q9UKY1 873 aaPredicted RBP6.72□□□□□ -1.33
CHUK-203ENST00000588656 NOD1Q9Y239 953 aa6.72□□□□□ -1.33
CHUK-203ENST00000588656 TCRBV5S4A2TA0A5A2 114 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 IGHA2P01877 340 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 RARBP10826 455 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 FCER1AP12319 257 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 EEF2P13639 858 aaKnown RBP6.71□□□□□ -1.34
CHUK-203ENST00000588656 FPGSQ05932 587 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 XP32Q5T750 250 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 ZNF468Q5VIY5 522 aaPredicted RBP6.71□□□□□ -1.34
CHUK-203ENST00000588656 CCDC129Q6ZRS4 1044 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 CD163Q86VB7 1156 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 FCHSD1Q86WN1 690 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 CPXCR1Q8N123 301 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 MICALL1Q8N3F8 863 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 PPP1R13LQ8WUF5 828 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 ZNF512BQ96KM6 892 aaPredicted RBP6.71□□□□□ -1.34
CHUK-203ENST00000588656 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.71□□□□□ -1.34
CHUK-203ENST00000588656 PRDM12Q9H4Q4 367 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 GINM1Q9NU53 330 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 TMEM39AQ9NV64 488 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 ISY1Q9ULR0 285 aaKnown RBP6.71□□□□□ -1.34
CHUK-203ENST00000588656 NOP58Q9Y2X3 529 aaKnown RBP6.71□□□□□ -1.34
CHUK-203ENST00000588656 MYH7BA7E2Y1 1941 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 TET1Q8NFU7 2136 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 SYNRGQ9UMZ2 1314 aa6.71□□□□□ -1.34
CHUK-203ENST00000588656 PRRC2BQ5JSZ5 2229 aaKnown RBP6.7□□□□□ -1.34
CHUK-203ENST00000588656 SMARCA5O60264 1052 aaPredicted RBP6.7□□□□□ -1.34
CHUK-203ENST00000588656 SKIP12755 728 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 PDIA4P13667 645 aaKnown RBP6.7□□□□□ -1.34
CHUK-203ENST00000588656 ALAS2P22557 587 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 CDK8P49336 464 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 SMAD3P84022 425 aaKnown RBP6.7□□□□□ -1.34
CHUK-203ENST00000588656 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
CHUK-203ENST00000588656 BEX3Q00994 111 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 FAAP100Q0VG06 881 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 SNX17Q15036 470 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 KCNA10Q16322 511 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 TMEM132AQ24JP5 1023 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 TSHZ3Q63HK5 1081 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 TMEM179Q6ZVK1 233 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 RHPN1Q8TCX5 695 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 VTI1AQ96AJ9 217 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 NECAB3Q96P71 396 aaPredicted RBP6.7□□□□□ -1.34
CHUK-203ENST00000588656 TINF2Q9BSI4 451 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 VCPKMTQ9H867 229 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 NEUROD4Q9HD90 331 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 STARD7Q9NQZ5 370 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 HOMER2Q9NSB8 354 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 HOXC10Q9NYD6 342 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 SCHIP1Q9P0W5 487 aaPredicted RBP6.7□□□□□ -1.34
CHUK-203ENST00000588656 RIPK3Q9Y572 518 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 TANC1Q9C0D5 1861 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 UMODL1Q5DID0 1318 aa6.7□□□□□ -1.34
CHUK-203ENST00000588656 NCOR1O75376 2440 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 TMEM265A0A087WTH1 108 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.69□□□□□ -1.34
CHUK-203ENST00000588656 USP17L12C9JPN9 530 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 USP17L21D6R901 530 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 VWA5AO00534 786 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 EFSO43281 561 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 STRNO43815 780 aa6.69□□□□□ -1.34
CHUK-203ENST00000588656 PRDM1O75626 825 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms