RNA–Protein interactions for RNA: ENST00000588507.5

TPM4-210, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-210ENST00000588507 C9orf78Q9NZ63 289 aaPredicted RBP8.49□□□□□ -1.05
TPM4-210ENST00000588507 CA14Q9ULX7 337 aa8.49□□□□□ -1.05
TPM4-210ENST00000588507 SRPK3Q9UPE1 567 aa8.49□□□□□ -1.05
TPM4-210ENST00000588507 RIPK3Q9Y572 518 aa8.49□□□□□ -1.05
TPM4-210ENST00000588507 PDS5AQ29RF7 1337 aaKnown RBP8.49□□□□□ -1.05
TPM4-210ENST00000588507 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.48□□□□□ -1.05
TPM4-210ENST00000588507 USP17L12C9JPN9 530 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 USP17L21D6R901 530 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 TK2O00142 265 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 C1QL1O75973 258 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 BAG3O95817 575 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 TOP3BO95985 862 aaKnown RBP8.48□□□□□ -1.05
TPM4-210ENST00000588507 ZNF853P0CG23 659 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 SLC4A3P48751 1232 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 FLIIQ13045 1269 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 RASGRF1Q13972 1273 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 BTG3Q14201 252 aaPredicted RBP8.48□□□□□ -1.05
TPM4-210ENST00000588507 AASDHQ4L235 1098 aaPredicted RBP8.48□□□□□ -1.05
TPM4-210ENST00000588507 RUFY4Q6ZNE9 571 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.48□□□□□ -1.053e-7■□□□□ 8.7
TPM4-210ENST00000588507 EEPD1Q7L9B9 569 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 KLHL23Q8NBE8 558 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 SEPT8Q92599 483 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 KCNK12Q9HB15 430 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 FBXO28Q9NVF7 368 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 SERPINB13Q9UIV8 391 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 PPP1R9AQ9ULJ8 1098 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 AKAP13Q12802 2813 aa8.48□□□□□ -1.05
TPM4-210ENST00000588507 NARSO43776 548 aaKnown RBP8.47□□□□□ -1.05
TPM4-210ENST00000588507 EOMESO95936 686 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 CNTN2Q02246 1040 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 ZNF252P-AS1Q0IIN9 211 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 PTK7Q13308 1070 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 ATP2B3Q16720 1220 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 BEND3Q5T5X7 828 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 LLGL2Q6P1M3 1020 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 SLC4A10Q6U841 1118 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 SESTD1Q86VW0 696 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 FBXO16Q8IX29 292 aaPredicted RBP8.47□□□□□ -1.05
TPM4-210ENST00000588507 CELF5Q8N6W0 485 aaKnown RBP8.47□□□□□ -1.05
TPM4-210ENST00000588507 OR6J1Q8NGC5 347 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 KLHDC4Q8TBB5 520 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 RASGRP4Q8TDF6 673 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 ACSF2Q96CM8 615 aaPredicted RBP8.47□□□□□ -1.05
TPM4-210ENST00000588507 SUCLG2Q96I99 432 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 BCO2Q9BYV7 579 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 VCPKMTQ9H867 229 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 AATFQ9NY61 560 aaKnown RBP eCLIP8.47□□□□□ -1.05
TPM4-210ENST00000588507 FBXO40Q9UH90 709 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 DBR1Q9UK59 544 aaKnown RBP8.47□□□□□ -1.05
TPM4-210ENST00000588507 RALGAPA1Q6GYQ0 2036 aa8.47□□□□□ -1.05
TPM4-210ENST00000588507 PARP14Q460N5 1801 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 SEC24BO95487 1268 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 NOVA1P51513 510 aaKnown RBP8.46□□□□□ -1.06
TPM4-210ENST00000588507 TROAPQ12815 778 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 TRIM71Q2Q1W2 868 aaKnown RBP8.46□□□□□ -1.06
TPM4-210ENST00000588507 CCDC102BQ68D86 513 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 XRRA1Q6P2D8 792 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 PJA1Q8NG27 643 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 SLC39A7Q92504 469 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 KAZALD1Q96I82 304 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 LRIG1Q96JA1 1093 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 FAM126AQ9BYI3 521 aaPredicted RBP8.46□□□□□ -1.06
TPM4-210ENST00000588507 EHD4Q9H223 541 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 RC3H2Q9HBD1 1191 aaKnown RBP8.46□□□□□ -1.06
TPM4-210ENST00000588507 VTA1Q9NP79 307 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 RAI14Q9P0K7 980 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 IGSF9Q9P2J2 1179 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 NEUROG3Q9Y4Z2 214 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 RAD50Q92878 1312 aa8.46□□□□□ -1.06
TPM4-210ENST00000588507 LAMA5O15230 3695 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 RSPH10B2B2RC85 870 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 EYA2O00167 538 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 MPHOSPH10O00566 681 aaKnown RBP8.45□□□□□ -1.06
TPM4-210ENST00000588507 RSPH10BP0C881 870 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 PPP4CP60510 307 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 ATAT1Q5SQI0 421 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 STPG1Q5TH74 334 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 PDE12Q6L8Q7 609 aaKnown RBP8.45□□□□□ -1.06
TPM4-210ENST00000588507 CHST13Q8NET6 341 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 HNRNPLLQ8WVV9 542 aaKnown RBP8.45□□□□□ -1.06
TPM4-210ENST00000588507 CASP10Q92851 521 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 ZNF689Q96CS4 500 aaPredicted RBP8.45□□□□□ -1.06
TPM4-210ENST00000588507 UBL7Q96S82 380 aaPredicted RBP8.45□□□□□ -1.06
TPM4-210ENST00000588507 MYL10Q9BUA6 226 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 WDR11Q9BZH6 1224 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 SH2D4AQ9H788 454 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 ARHGEF10LQ9HCE6 1279 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 KCNK4Q9NYG8 393 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 TMX2Q9Y320 296 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 MSRB2Q9Y3D2 182 aa8.45□□□□□ -1.06
TPM4-210ENST00000588507 A6NJR5 290 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 PPFIA3O75145 1194 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 LRRN2O75325 713 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 WEE2P0C1S8 567 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 SHMT1P34896 483 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 GNAI1P63096 354 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 KCNC4Q03721 635 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 UBE3AQ05086 875 aa8.44□□□□□ -1.06
TPM4-210ENST00000588507 NONOQ15233 471 aaKnown RBP eCLIP8.44□□□□□ -1.062e-8■■■■■ 32.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms