RNA–Protein interactions for RNA: ENST00000588269.1

PRKCSH-207, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-207ENST00000588269 NEDD9Q14511 834 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 GRIN2CQ14957 1233 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 WWC2Q6AWC2 1192 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 CCDC62Q6P9F0 684 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 GIMAP8Q8ND71 665 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 BICD2Q8TD16 824 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 GPKOWQ92917 476 aaPredicted RBP eCLIP13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 PRDM6Q9NQX0 595 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 PDRG1Q9NUG6 133 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 BARHL2Q9NY43 387 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 NOD1Q9Y239 953 aa13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 V9GY48 417 aaPredicted RBP13.45□□□□□ -0.26
PRKCSH-207ENST00000588269 ARIH2O95376 493 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 SCG2P13521 617 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 GNA11P29992 359 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 FPGSQ05932 587 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 PTPN11Q06124 597 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 PFKFB3Q16875 520 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 LY6KQ17RY6 165 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 FAM47CQ5HY64 1035 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 NFRKBQ6P4R8 1299 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 USP17L6PQ6QN14 398 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 FAM126BQ8IXS8 530 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 CCDC155Q8N6L0 562 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 AFG1LQ8WV93 481 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 INPP4AQ96PE3 977 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 RNF26Q9BY78 433 aaPredicted RBP13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 UPF3BQ9BZI7 483 aaKnown RBP13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 MLXIPQ9HAP2 919 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 RIC8AQ9NPQ8 531 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 DDX41Q9UJV9 622 aaKnown RBP13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 KIAA1217Q5T5P2 1943 aa13.44□□□□□ -0.26
PRKCSH-207ENST00000588269 hCG_1642624A0A1W2PR95 340 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 ESYT2A0FGR8 921 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 MEIS2O14770 477 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 GGPS1O95749 300 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 ACRP10323 421 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 UBA1P22314 1058 aaKnown RBP13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 PBX2P40425 430 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 CDK7P50613 346 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 EVCP57679 992 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 ARHGAP1Q07960 439 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 PPIGQ13427 754 aaKnown RBP eCLIP13.43□□□□□ -0.263e-8■□□□□ 8.3
PRKCSH-207ENST00000588269 FAM177A1Q8N128 213 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 TMEM199Q8N511 208 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 SLC43A3Q8NBI5 491 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 GPRASP2Q96D09 838 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 ZNF274Q96GC6 653 aaPredicted RBP13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 SPATA33Q96N06 139 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 PPP1R12CQ9BZL4 782 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 C6orf50Q9HD87 102 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 TBX21Q9UL17 535 aa13.43□□□□□ -0.26
PRKCSH-207ENST00000588269 CDH23Q9H251 3354 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 RBAK-RBAKDNI3L0D1 243 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 STXBP3O00186 592 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 TIMP1P01033 207 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 IFNAR1P17181 557 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 DNAJB2P25686 324 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 CDC27P30260 824 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 ICAM3P32942 547 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 FUT2Q10981 343 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 MTMR1Q13613 665 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 CELF3Q5SZQ8 465 aaKnown RBP13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 C16orf59Q7L2K0 433 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 REXO1Q8N1G1 1221 aaKnown RBP13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 PPM1EQ8WY54 764 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 COPS5Q92905 334 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 SENP7Q9BQF6 1050 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 ALDH8A1Q9H2A2 487 aaPredicted RBP13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 MTIF3Q9H2K0 278 aaKnown RBP13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 HIPK3Q9H422 1215 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 TCEAL9Q9UHQ7 104 aa13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 ZNF215Q9UL58 517 aaPredicted RBP13.42□□□□□ -0.26
PRKCSH-207ENST00000588269 SMCO2A6NFE2 343 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 MAFGO15525 162 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PRPF3O43395 683 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 XBP1P17861 261 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PDIA3P30101 505 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 ADD1P35611 737 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PSMC6P62333 389 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 SSRP1Q08945 709 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 UBE2SQ16763 222 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 TMEM63BQ5T3F8 832 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PSRC1Q6PGN9 363 aaPredicted RBP13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 C7orf31Q8N865 590 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 SLC26A6Q9BXS9 759 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 UPF2Q9HAU5 1272 aaKnown RBP13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PCDHA6Q9UN73 950 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PCDHA8Q9Y5H6 950 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 PRUNE2Q8WUY3 3088 aa13.41□□□□□ -0.26
PRKCSH-207ENST00000588269 UMODL1Q5DID0 1318 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 SPATA31C2B4DYI2 1134 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 PPFIA4O75335 1185 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 RGS20O76081 388 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 F2P00734 622 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 CD4P01730 458 aa13.4□□□□□ -0.26
PRKCSH-207ENST00000588269 CSF2RAP15509 400 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms