RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 FBXO11Q86XK2 927 aa17.1■□□□□ 0.33
HDAC5-207ENST00000588261 COPS5Q92905 334 aa17.1■□□□□ 0.33
HDAC5-207ENST00000588261 NOC4LQ9BVI4 516 aaKnown RBP17.1■□□□□ 0.33
HDAC5-207ENST00000588261 MTIF3Q9H2K0 278 aaKnown RBP17.1■□□□□ 0.33
HDAC5-207ENST00000588261 VAT1LQ9HCJ6 419 aa17.1■□□□□ 0.33
HDAC5-207ENST00000588261 PTPDC1A2A3K4 754 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 K7ELQ4 463 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-207ENST00000588261 ARIH2O95376 493 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 DEXIO95424 95 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 CALML3P27482 149 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 HMGN5P82970 282 aaKnown RBP17.09■□□□□ 0.33
HDAC5-207ENST00000588261 SSRP1Q08945 709 aaKnown RBP17.09■□□□□ 0.33
HDAC5-207ENST00000588261 ST3GAL1Q11201 340 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 PFKFB3Q16875 520 aaPredicted RBP17.09■□□□□ 0.33
HDAC5-207ENST00000588261 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 HSCBQ8IWL3 235 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 CMTR1Q8N1G2 835 aaKnown RBP17.09■□□□□ 0.33
HDAC5-207ENST00000588261 SAMD3Q8N6K7 520 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
HDAC5-207ENST00000588261 WDR11Q9BZH6 1224 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
HDAC5-207ENST00000588261 CABYRO75952 493 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 CCL23P55773 120 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 PURAQ00577 322 aaKnown RBP17.08■□□□□ 0.32
HDAC5-207ENST00000588261 CUL4AQ13619 759 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 RAB30Q15771 203 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 RNF207Q6ZRF8 634 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 CCDC82Q8N4S0 544 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 NECAB1Q8N987 351 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 RGS22Q8NE09 1264 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 NSUN7Q8NE18 718 aaKnown RBP17.08■□□□□ 0.32
HDAC5-207ENST00000588261 HERVK_113Q902F9 699 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 WASF1Q92558 559 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 SLC26A6Q9BXS9 759 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 HIPK3Q9H422 1215 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 IL23AQ9NPF7 189 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 TRMT13Q9NUP7 481 aaKnown RBP17.08■□□□□ 0.32
HDAC5-207ENST00000588261 MSRAQ9UJ68 235 aa17.08■□□□□ 0.32
HDAC5-207ENST00000588261 MRPL11Q9Y3B7 192 aaKnown RBP17.08■□□□□ 0.32
HDAC5-207ENST00000588261 V9GY48 417 aaPredicted RBP17.08■□□□□ 0.32
HDAC5-207ENST00000588261 PPP1R11O60927 126 aaPredicted RBP17.07■□□□□ 0.32
HDAC5-207ENST00000588261 CTDNEP1O95476 244 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 SCG2P13521 617 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 GHRHRQ02643 423 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 CCDC83Q8IWF9 413 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 SMARCC2Q8TAQ2 1214 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
HDAC5-207ENST00000588261 PHKBQ93100 1093 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 SCLYQ96I15 445 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 SEZ6LQ9BYH1 1024 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 GLT8D2Q9H1C3 349 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 MAP3K20Q9NYL2 800 aaKnown RBP17.07■□□□□ 0.32
HDAC5-207ENST00000588261 YBX2Q9Y2T7 364 aaKnown RBP17.07■□□□□ 0.32
HDAC5-207ENST00000588261 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 SCN10AQ9Y5Y9 1956 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 GBF1Q92538 1859 aa17.07■□□□□ 0.32
HDAC5-207ENST00000588261 MUC3AQ02505 3323 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 CYP2C9P11712 490 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 ADGRE1Q14246 886 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 PKN1Q16512 942 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 USH1GQ495M9 461 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 MCF2L2Q86YR7 1114 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 INTS4Q96HW7 963 aaKnown RBP17.06■□□□□ 0.32
HDAC5-207ENST00000588261 SH3GLB2Q9NR46 395 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 BARHL2Q9NY43 387 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 THEGQ9P2T0 379 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 KIF3AQ9Y496 699 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.06■□□□□ 0.32
HDAC5-207ENST00000588261 CHD7Q9P2D1 2997 aa17.06■□□□□ 0.32
HDAC5-207ENST00000588261 LOC102724159A0A0B4J2E5 919 aa17.05■□□□□ 0.32
HDAC5-207ENST00000588261 ESYT2A0FGR8 921 aa17.05■□□□□ 0.32
HDAC5-207ENST00000588261 OPLAHO14841 1288 aa17.05■□□□□ 0.32
HDAC5-207ENST00000588261 PWP2Q15269 919 aaKnown RBP17.05■□□□□ 0.32
HDAC5-207ENST00000588261 CCDC148Q8NFR7 591 aa17.05■□□□□ 0.32
HDAC5-207ENST00000588261 PPM1EQ8WY54 764 aa17.05■□□□□ 0.32
HDAC5-207ENST00000588261 CTAGE1Q96RT6 745 aa17.05■□□□□ 0.32
HDAC5-207ENST00000588261 TSPYL2Q9H2G4 693 aaPredicted RBP17.05■□□□□ 0.32
HDAC5-207ENST00000588261 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
HDAC5-207ENST00000588261 ZEB2O60315 1214 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 XBP1P17861 261 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 COL9A1P20849 921 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 MRPS5P82675 430 aaKnown RBP17.04■□□□□ 0.32
HDAC5-207ENST00000588261 WWC2Q6AWC2 1192 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 CCDC62Q6P9F0 684 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 OTOP2Q7RTS6 562 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 HEATR3Q7Z4Q2 680 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 OR6J1Q8NGC5 347 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 SYTL5Q8TDW5 730 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-207ENST00000588261 TAAR1Q96RJ0 339 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 PRDM12Q9H4Q4 367 aa17.04■□□□□ 0.32
HDAC5-207ENST00000588261 ORC3Q9UBD5 711 aaPredicted RBP17.04■□□□□ 0.32
HDAC5-207ENST00000588261 SCN5AQ14524 2016 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 A6NJR5 290 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 STXBP3O00186 592 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 FGBP02675 491 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 MYL3P08590 195 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 MYOGP15173 224 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 RABGGTBP53611 331 aa17.03■□□□□ 0.32
HDAC5-207ENST00000588261 BECN1Q14457 450 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms