RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 ARHGAP1Q07960 439 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 SCRN1Q12765 414 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 STK3Q13188 491 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 ITGA7Q13683 1181 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 NEDD9Q14511 834 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 UBE2SQ16763 222 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 CELF3Q5SZQ8 465 aaKnown RBP11.57□□□□□ -0.56
TPM4-207ENST00000588032 MYSM1Q5VVJ2 828 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 SLC43A3Q8NBI5 491 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 PPTC7Q8NI37 304 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 COPS5Q92905 334 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 GPRASP2Q96D09 838 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 SENP7Q9BQF6 1050 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 MTG1Q9BT17 334 aaPredicted RBP11.57□□□□□ -0.56
TPM4-207ENST00000588032 RTEL1Q9NZ71 1219 aa11.57□□□□□ -0.56
TPM4-207ENST00000588032 TLR3O15455 904 aaKnown RBP11.56□□□□□ -0.56
TPM4-207ENST00000588032 PPFIA4O75335 1185 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 MYL3P08590 195 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 CLTBP09497 229 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 XBP1P17861 261 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 PTGS1P23219 599 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 DGKDQ16760 1214 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 GALNT17Q6IS24 598 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 REXO1Q8N1G1 1221 aaKnown RBP11.56□□□□□ -0.56
TPM4-207ENST00000588032 AFG1LQ8WV93 481 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 LBHD1Q9BQE6 289 aaPredicted RBP11.56□□□□□ -0.56
TPM4-207ENST00000588032 MLXIPQ9HAP2 919 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 UBIAD1Q9Y5Z9 338 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 STK36Q9NRP7 1315 aa11.56□□□□□ -0.56
TPM4-207ENST00000588032 PQBP1O60828 265 aaKnown RBP11.55□□□□□ -0.56
TPM4-207ENST00000588032 GGPS1O95749 300 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 MMP3P08254 477 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 SYN1P17600 705 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 UBA1P22314 1058 aaKnown RBP11.55□□□□□ -0.56
TPM4-207ENST00000588032 BMP8BP34820 402 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 SREBF1P36956 1147 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 NLRP5P59047 1200 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 PTPN11Q06124 597 aaPredicted RBP11.55□□□□□ -0.56
TPM4-207ENST00000588032 ME3Q16798 604 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 NFRKBQ6P4R8 1299 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 WASF1Q92558 559 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 SPATA33Q96N06 139 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 ANO3Q9BYT9 981 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 JADE2Q9NQC1 790 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 ZMYND8Q9ULU4 1186 aaPredicted RBP11.55□□□□□ -0.56
TPM4-207ENST00000588032 LIMCH1Q9UPQ0 1083 aa11.55□□□□□ -0.56
TPM4-207ENST00000588032 A0A1W2PPC1 479 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 KIAA0355O15063 1070 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 CYP3A4P08684 503 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 SUPT20HL2P0C7V6 817 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 ATXN8OSP0DMR3 200 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 HOXD8P13378 290 aaPredicted RBP11.54□□□□□ -0.56
TPM4-207ENST00000588032 ITGB5P18084 799 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 SP2Q02086 613 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 FAAP100Q0VG06 881 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 MTMR1Q13613 665 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 CEP55Q53EZ4 464 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 METTL7BQ6UX53 244 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 NIPA1Q7RTP0 329 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 FAM126BQ8IXS8 530 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 ZFP91Q96JP5 570 aaPredicted RBP11.54□□□□□ -0.56
TPM4-207ENST00000588032 ZSCAN31Q96LW9 406 aaPredicted RBP11.54□□□□□ -0.56
TPM4-207ENST00000588032 KIF2CQ99661 725 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 GDF15Q99988 308 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 MXRA8Q9BRK3 442 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 KATNAL1Q9BW62 490 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 PRDM5Q9NQX1 630 aaPredicted RBP11.54□□□□□ -0.56
TPM4-207ENST00000588032 PDLIM7Q9NR12 457 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 TMEM39AQ9NV64 488 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 VPS54Q9P1Q0 977 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 GTF3C3Q9Y5Q9 886 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 GRIN2DO15399 1336 aa11.54□□□□□ -0.56
TPM4-207ENST00000588032 PDE4DIPQ5VU43 2346 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 KIAA1217Q5T5P2 1943 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 NOP56O00567 594 aaKnown RBP11.53□□□□□ -0.56
TPM4-207ENST00000588032 PPFIA3O75145 1194 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 CD4P01730 458 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 ZNF76P36508 570 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 PSMC6P62333 389 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 ARHGAP4P98171 946 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 SEMA3FQ13275 785 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 RABEP1Q15276 862 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 HSDL1Q3SXM5 330 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 JAKMIP3Q5VZ66 844 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 DAGLBQ8NCG7 672 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 GTF3C6Q969F1 213 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 PRO3102Q9H379 93 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 PCDHA4Q9UN74 947 aa11.53□□□□□ -0.56
TPM4-207ENST00000588032 COLQQ9Y215 455 aaPredicted RBP11.53□□□□□ -0.56
TPM4-207ENST00000588032 ALPK3Q96L96 1907 aa11.52□□□□□ -0.56
TPM4-207ENST00000588032 TRIM43BA6NCK2 446 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 MEIS1O00470 390 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 CTDNEP1O95476 244 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 RAG1P15918 1043 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 MAGEA10P43363 369 aaPredicted RBP11.52□□□□□ -0.57
TPM4-207ENST00000588032 USP11P51784 963 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 NBPF20Q3BBV1 942 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 CYFIP1Q7L576 1253 aa11.52□□□□□ -0.57
TPM4-207ENST00000588032 SESTD1Q86VW0 696 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms