RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 MICAL3Q7RTP6 2002 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 UPP2O95045 317 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 THPOP40225 353 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 ZNF200P98182 395 aaPredicted RBP10.04□□□□□ -0.8
SDF2-204ENST00000587338 COL19A1Q14993 1142 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 FBXO11Q86XK2 927 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 DHX37Q8IY37 1157 aaKnown RBP10.04□□□□□ -0.8
SDF2-204ENST00000587338 TMEM192Q8IY95 271 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 PRSS33Q8NF86 280 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 DBF4BQ8NFT6 615 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 POP1Q99575 1024 aaKnown RBP10.04□□□□□ -0.8
SDF2-204ENST00000587338 TMEM47Q9BQJ4 181 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 FSD1Q9BTV5 496 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 WDR19Q8NEZ3 1342 aa10.04□□□□□ -0.8
SDF2-204ENST00000587338 RSPH10B2B2RC85 870 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 ST18O60284 1047 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 CSPG5O95196 566 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 F2P00734 622 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 RSPH10BP0C881 870 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 PDHBP11177 359 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 TOP1P11387 765 aaKnown RBP10.03□□□□□ -0.8
SDF2-204ENST00000587338 PTPRZ1P23471 2315 aaPredicted RBP10.03□□□□□ -0.8
SDF2-204ENST00000587338 NOVP48745 357 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 PTPN5P54829 565 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 MKRN4PQ13434 485 aaPredicted RBP10.03□□□□□ -0.8
SDF2-204ENST00000587338 HERC4Q5GLZ8 1057 aaPredicted RBP10.03□□□□□ -0.8
SDF2-204ENST00000587338 RRP12Q5JTH9 1297 aaKnown RBP10.03□□□□□ -0.8
SDF2-204ENST00000587338 RNF135Q8IUD6 432 aa10.03□□□□□ -0.8
SDF2-204ENST00000587338 CHMP4BQ9H444 224 aaKnown RBP10.03□□□□□ -0.8
SDF2-204ENST00000587338 FOXP2O15409 715 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 NCK2O43639 380 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 ORC4O43929 436 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 SORBS3O60504 671 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 CTNNB1P35222 781 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 LTBRP36941 435 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 ZNF543Q08ER8 600 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 SMAD2Q15796 467 aaKnown RBP10.02□□□□□ -0.81
SDF2-204ENST00000587338 STXBP2Q15833 593 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 ZMYM1Q5SVZ6 1142 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 IER5LQ5T953 404 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 PPTC7Q8NI37 304 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 NSUN6Q8TEA1 469 aaKnown RBP10.02□□□□□ -0.81
SDF2-204ENST00000587338 SEPT8Q92599 483 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 TAAR1Q96RJ0 339 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 IFIH1Q9BYX4 1025 aaKnown RBP10.02□□□□□ -0.81
SDF2-204ENST00000587338 MRVI1Q9Y6F6 885 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 VPS13AQ96RL7 3174 aa10.02□□□□□ -0.81
SDF2-204ENST00000587338 TMEM221A6NGB7 291 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 M0R296 226 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 STXBP3O00186 592 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 HAS3O00219 553 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 MBTPS2O43462 519 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 CTSHP09668 335 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 GOLGA8HP0CJ92 632 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 EIF2AK2P19525 551 aaKnown RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 DLX2Q07687 328 aaPredicted RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 HYAL1Q12794 435 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 LAMC2Q13753 1193 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 HIC1Q14526 733 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 PLEKHG4Q58EX7 1191 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 SERINC5Q86VE9 423 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 SUGP1Q8IWZ8 645 aaKnown RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 RGS22Q8NE09 1264 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 SYTL5Q8TDW5 730 aaPredicted RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 TBC1D5Q92609 795 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 EDAQ92838 391 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 TOP1MTQ969P6 601 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 EMID1Q96A84 441 aaPredicted RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 PBXIP1Q96AQ6 731 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 RMDN3Q96TC7 470 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 CPVLQ9H3G5 476 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 COL20A1Q9P218 1284 aa10.01□□□□□ -0.81
SDF2-204ENST00000587338 DDX41Q9UJV9 622 aaKnown RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 RIF1Q5UIP0 2472 aaKnown RBP10.01□□□□□ -0.81
SDF2-204ENST00000587338 COL4A6Q14031 1691 aa10□□□□□ -0.81
SDF2-204ENST00000587338 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10□□□□□ -0.81
SDF2-204ENST00000587338 GFRA3O60609 400 aa10□□□□□ -0.81
SDF2-204ENST00000587338 TBX10O75333 385 aa10□□□□□ -0.81
SDF2-204ENST00000587338 EIF3JO75822 258 aaKnown RBP10□□□□□ -0.81
SDF2-204ENST00000587338 GTF2F1P35269 517 aaKnown RBP eCLIP10□□□□□ -0.81
SDF2-204ENST00000587338 SMAD4Q13485 552 aaKnown RBP10□□□□□ -0.81
SDF2-204ENST00000587338 CDC37Q16543 378 aaPredicted RBP10□□□□□ -0.81
SDF2-204ENST00000587338 CTC1Q2NKJ3 1217 aa10□□□□□ -0.81
SDF2-204ENST00000587338 VPS53Q5VIR6 699 aa10□□□□□ -0.81
SDF2-204ENST00000587338 ARHGEF16Q5VV41 709 aa10□□□□□ -0.81
SDF2-204ENST00000587338 TRIM67Q6ZTA4 783 aa10□□□□□ -0.81
SDF2-204ENST00000587338 FIBCD1Q8N539 461 aa10□□□□□ -0.81
SDF2-204ENST00000587338 ATP6V0A1Q93050 837 aa10□□□□□ -0.81
SDF2-204ENST00000587338 SPATA33Q96N06 139 aa10□□□□□ -0.81
SDF2-204ENST00000587338 IWS1Q96ST2 819 aa10□□□□□ -0.81
SDF2-204ENST00000587338 PRRX2Q99811 253 aa10□□□□□ -0.81
SDF2-204ENST00000587338 C11orf84Q9BUA3 381 aaPredicted RBP10□□□□□ -0.81
SDF2-204ENST00000587338 UBA5Q9GZZ9 404 aa10□□□□□ -0.81
SDF2-204ENST00000587338 IGFLR1Q9H665 355 aa10□□□□□ -0.81
SDF2-204ENST00000587338 FAM86C1Q9NVL1 165 aa10□□□□□ -0.81
SDF2-204ENST00000587338 CD207Q9UJ71 328 aa10□□□□□ -0.81
SDF2-204ENST00000587338 ANAPC4Q9UJX5 808 aa10□□□□□ -0.81
SDF2-204ENST00000587338 ABCB11O95342 1321 aa10□□□□□ -0.81
SDF2-204ENST00000587338 NLRC5Q86WI3 1866 aa10□□□□□ -0.81
SDF2-204ENST00000587338 C17orf102A2RUQ5 167 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms