RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 PSMA5P28066 241 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 CDC27P30260 824 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 ICAM3P32942 547 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 RCAN1P53805 252 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 UBE2SQ16763 222 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 HSDL1Q3SXM5 330 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 ZNF697Q5TEC3 545 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 PCNX4Q63HM2 1172 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 FAM109BQ6ICB4 259 aaPredicted RBP20.34■□□□□ 0.85
TPM4-206ENST00000587201 XRRA1Q6P2D8 792 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 BRF1Q92994 677 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 SCLYQ96I15 445 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 INPP4AQ96PE3 977 aaPredicted RBP20.34■□□□□ 0.85
TPM4-206ENST00000587201 ALG1Q9BT22 464 aa20.34■□□□□ 0.85
TPM4-206ENST00000587201 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.33■□□□□ 0.85
TPM4-206ENST00000587201 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.33■□□□□ 0.85
TPM4-206ENST00000587201 SPDYE3A6NKU9 549 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 FIBPO43427 364 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 PPFIA4O75335 1185 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 CENPBP07199 599 aaPredicted RBP20.33■□□□□ 0.85
TPM4-206ENST00000587201 ZNF286BP0CG31 522 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 RPS6KB1P23443 525 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 PSEN2P49810 448 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 METAP2P50579 478 aaKnown RBP eCLIP20.33■□□□□ 0.85
TPM4-206ENST00000587201 NAPAP54920 295 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 FUT2Q10981 343 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 MFSD10Q14728 455 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 WWC2Q6AWC2 1192 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 NLRX1Q86UT6 975 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 FAM161BQ96MY7 647 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 FAM217BQ9NTX9 383 aaPredicted RBP20.33■□□□□ 0.85
TPM4-206ENST00000587201 MTMR10Q9NXD2 777 aa20.33■□□□□ 0.85
TPM4-206ENST00000587201 V9GY48 417 aaPredicted RBP20.33■□□□□ 0.85
TPM4-206ENST00000587201 MYH7BA7E2Y1 1941 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 SPATA31C2B4DYI2 1134 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 EPB41L2O43491 1005 aaKnown RBP20.32■□□□□ 0.84
TPM4-206ENST00000587201 FGBP02675 491 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 NEDD9Q14511 834 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 PTGISQ16647 500 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 KIAA0753Q2KHM9 967 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 SESTD1Q86VW0 696 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 RPUSD2Q8IZ73 545 aaKnown RBP20.32■□□□□ 0.84
TPM4-206ENST00000587201 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
TPM4-206ENST00000587201 CCDC196A0A1B0GTZ2 297 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 NOP56O00567 594 aaKnown RBP20.31■□□□□ 0.84
TPM4-206ENST00000587201 F2P00734 622 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 HOXD8P13378 290 aaPredicted RBP20.31■□□□□ 0.84
TPM4-206ENST00000587201 ADD1P35611 737 aaKnown RBP20.31■□□□□ 0.84
TPM4-206ENST00000587201 SEMA3FQ13275 785 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 GDF6Q6KF10 455 aaPredicted RBP20.31■□□□□ 0.84
TPM4-206ENST00000587201 PPP1R18Q6NYC8 613 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 CYFIP1Q7L576 1253 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 RETREG2Q8NC44 543 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 MTIF3Q9H2K0 278 aaKnown RBP20.31■□□□□ 0.84
TPM4-206ENST00000587201 BCAS3Q9H6U6 928 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 HDAC6Q9UBN7 1215 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 GTF2IRD1Q9UHL9 959 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 PCDHA6Q9UN73 950 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 PCDHA8Q9Y5H6 950 aa20.31■□□□□ 0.84
TPM4-206ENST00000587201 hCG_1984214I3L0E3 225 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 HAS3O00219 553 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 BFSP2Q13515 415 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 METTL7BQ6UX53 244 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 OTOP2Q7RTS6 562 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 ZNF713Q8N859 430 aaPredicted RBP20.3■□□□□ 0.84
TPM4-206ENST00000587201 HERVK_113Q902F9 699 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 EHMT1Q9H9B1 1298 aa20.3■□□□□ 0.84
TPM4-206ENST00000587201 PITPNM1O00562 1244 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 RASIP1Q5U651 963 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 TYW1BQ6NUM6 668 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 DEFB128Q7Z7B8 93 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 FBXL16Q8N461 479 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 CCDC155Q8N6L0 562 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 SENP7Q9BQF6 1050 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 USP26Q9BXU7 913 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 RIC8AQ9NPQ8 531 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 BARHL2Q9NY43 387 aa20.29■□□□□ 0.84
TPM4-206ENST00000587201 SMCO2A6NFE2 343 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 STXBP3O00186 592 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 ADCY7P51828 1080 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 CAGE1Q8TC20 777 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 GPRASP2Q96D09 838 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 CDHR1Q96JP9 859 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 C16orf70Q9BSU1 422 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 AGXT2Q9BYV1 514 aa20.28■□□□□ 0.84
TPM4-206ENST00000587201 LGALS2P05162 132 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 PFKMP08237 780 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 IQCF3P0C7M6 154 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 ITGB5P18084 799 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 RFC2P35250 354 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 SP4Q02446 784 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 RUFY3Q7L099 469 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 GIMAP8Q8ND71 665 aaPredicted RBP20.27■□□□□ 0.84
TPM4-206ENST00000587201 CTAGE1Q96RT6 745 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 GPR20Q99678 358 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 SEMA6BQ9H3T3 888 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 ZSWIM6Q9HCJ5 1215 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 CXXC1Q9P0U4 656 aaPredicted RBP20.27■□□□□ 0.84
TPM4-206ENST00000587201 STXBP5LQ9Y2K9 1186 aa20.27■□□□□ 0.84
TPM4-206ENST00000587201 UBIAD1Q9Y5Z9 338 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms