RNA–Protein interactions for RNA: ENST00000586477.1

ATG4D-205, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-205ENST00000586477 HSD17B4P51659 736 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 FSCN1Q16658 493 aaKnown RBP18.4■□□□□ 0.54
ATG4D-205ENST00000586477 DAGLBQ8NCG7 672 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 PHF20Q9BVI0 1012 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 WDR11Q9BZH6 1224 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 EHMT1Q9H9B1 1298 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 SPC25Q9HBM1 224 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 RIC8AQ9NPQ8 531 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 PRDM5Q9NQX1 630 aaPredicted RBP18.4■□□□□ 0.54
ATG4D-205ENST00000586477 FOXD4L1Q9NU39 408 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 PCDHA4Q9UN74 947 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 Q9Y3F1 56 aa18.4■□□□□ 0.54
ATG4D-205ENST00000586477 GCOM1H8Y6P7 765 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-205ENST00000586477 KIAA0355O15063 1070 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 FOSP01100 380 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-205ENST00000586477 MMP1P03956 469 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 CLTBP09497 229 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 POLR2MP0CAP2 368 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 PDE4DQ08499 809 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 GNL2Q13823 731 aaKnown RBP18.39■□□□□ 0.53
ATG4D-205ENST00000586477 LRIT3Q3SXY7 679 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 KRT40Q6A162 431 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 CXCL17Q6UXB2 119 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 REXO1Q8N1G1 1221 aaKnown RBP18.39■□□□□ 0.53
ATG4D-205ENST00000586477 SLC43A3Q8NBI5 491 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 COPS5Q92905 334 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 BADQ92934 168 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 GLT1D1Q96MS3 346 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 TOX2Q96NM4 488 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 MPHOSPH6Q99547 160 aaKnown RBP18.39■□□□□ 0.53
ATG4D-205ENST00000586477 SCN10AQ9Y5Y9 1956 aa18.39■□□□□ 0.53
ATG4D-205ENST00000586477 B4DLN1 442 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 KRT2P35908 639 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 AP3B2Q13367 1082 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 CCDC62Q6P9F0 684 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 AIFM3Q96NN9 605 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 AP5M1Q9H0R1 490 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 TBX21Q9UL17 535 aa18.38■□□□□ 0.53
ATG4D-205ENST00000586477 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-205ENST00000586477 SPDYE3A6NKU9 549 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 ARVCFO00192 962 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 CFBP00751 764 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 EPHB4P54760 987 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 BLIDQ8IZY5 108 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 SPRYD3Q8NCJ5 442 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 RMDN3Q96TC7 470 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 PXMP2Q9NR77 195 aa18.37■□□□□ 0.53
ATG4D-205ENST00000586477 MYH7BA7E2Y1 1941 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 STX6O43752 255 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 EIF2AK2P19525 551 aaKnown RBP18.36■□□□□ 0.53
ATG4D-205ENST00000586477 SYT1P21579 422 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 HOXA13P31271 388 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-205ENST00000586477 PSMC6P62333 389 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 C9orf50Q5SZB4 431 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 TYW1BQ6NUM6 668 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 GPR153Q6NV75 609 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 FAM126BQ8IXS8 530 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 IL31RAQ8NI17 732 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 NSUN6Q8TEA1 469 aaKnown RBP18.36■□□□□ 0.53
ATG4D-205ENST00000586477 SCFD2Q8WU76 684 aa18.36■□□□□ 0.53
ATG4D-205ENST00000586477 FOXP1Q9H334 677 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-205ENST00000586477 CIZ1Q9ULV3 898 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-205ENST00000586477 VPS37CA5D8V6 355 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-205ENST00000586477 RGS20O76081 388 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 CD4P01730 458 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 NUCB2P80303 420 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 KRT25Q7Z3Z0 450 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 DIS3L2Q8IYB7 885 aaKnown RBP18.35■□□□□ 0.53
ATG4D-205ENST00000586477 OR6J1Q8NGC5 347 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 IWS1Q96ST2 819 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 TMEM39AQ9NV64 488 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 KCNJ14Q9UNX9 436 aa18.35■□□□□ 0.53
ATG4D-205ENST00000586477 CCDC194A0A1B0GVG4 234 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 DCDC2CA8MYV0 355 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 CABYRO75952 493 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 NR3C2P08235 984 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 PURAQ00577 322 aaKnown RBP18.34■□□□□ 0.53
ATG4D-205ENST00000586477 SHHQ15465 462 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 DEFB123Q8N688 67 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 VTI1AQ96AJ9 217 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 PDCD2LQ9BRP1 358 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 ZSCAN16Q9H4T2 348 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-205ENST00000586477 COL6A3P12111 3177 aa18.34■□□□□ 0.53
ATG4D-205ENST00000586477 A6NJR5 290 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 MEIS2O14770 477 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 NKRFO15226 690 aaKnown RBP eCLIP18.33■□□□□ 0.52
ATG4D-205ENST00000586477 TXNP10599 105 aaKnown RBP18.33■□□□□ 0.52
ATG4D-205ENST00000586477 FOSBP53539 338 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 ARHGAP1Q07960 439 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 ITGA7Q13683 1181 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 STXBP2Q15833 593 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 LY6KQ17RY6 165 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 ARHGEF16Q5VV41 709 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 MCTP1Q6DN14 999 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 SEPT14Q6ZU15 432 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 BRAPQ7Z569 592 aa18.33■□□□□ 0.52
ATG4D-205ENST00000586477 NAP1L4Q99733 375 aaKnown RBP18.33■□□□□ 0.52
ATG4D-205ENST00000586477 FRMPD4Q14CM0 1322 aa18.32■□□□□ 0.52
ATG4D-205ENST00000586477 MROH7Q68CQ1 1323 aa18.32■□□□□ 0.52
ATG4D-205ENST00000586477 CLK2P49760 499 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms