RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 GRK4P32298 578 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 SREBF1P36956 1147 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 CACNB2Q08289 660 aaPredicted RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 NONOQ15233 471 aaKnown RBP eCLIP14.34□□□□□ -0.11
VMP1-202ENST00000585847 PWP2Q15269 919 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 ARHGEF16Q5VV41 709 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 ARL6IP4Q66PJ3 421 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 ADALQ6DHV7 355 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 VSIG10LQ86VR7 867 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 MSL3Q8N5Y2 521 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 SLAIN1Q8ND83 568 aa14.34□□□□□ -0.11
VMP1-202ENST00000585847 NSUN6Q8TEA1 469 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 DDX19AQ9NUU7 478 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 ADD3Q9UEY8 706 aaKnown RBP14.34□□□□□ -0.11
VMP1-202ENST00000585847 ASB14A6NK59 587 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 H0YGN5 161 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 WNT7AO00755 349 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 CUTAO60888 179 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 CYBAP13498 195 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 ME1P48163 572 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 TMEM63BQ5T3F8 832 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 TAPT1Q6NXT6 567 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 MOXD1Q6UVY6 613 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 CCDC73Q6ZRK6 1079 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 TRMT44Q8IYL2 757 aaKnown RBP14.33□□□□□ -0.12
VMP1-202ENST00000585847 DPF3Q92784 378 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 IWS1Q96ST2 819 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 FRMPD3Q5JV73 1810 aa14.33□□□□□ -0.12
VMP1-202ENST00000585847 DOCK5Q9H7D0 1870 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 SPDYE3A6NKU9 549 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 ADCY6O43306 1168 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 HMGCRP04035 888 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 INHAP05111 366 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 SEMA3FQ13275 785 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 TTC38Q5R3I4 469 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 PCNX4Q63HM2 1172 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 FBXO16Q8IX29 292 aaPredicted RBP14.32□□□□□ -0.12
VMP1-202ENST00000585847 KRI1Q8N9T8 703 aaKnown RBP14.32□□□□□ -0.12
VMP1-202ENST00000585847 PDGFCQ9NRA1 345 aa14.32□□□□□ -0.12
VMP1-202ENST00000585847 RBM47A0AV96 593 aaKnown RBP14.31□□□□□ -0.12
VMP1-202ENST00000585847 CTAGE5O15320 804 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 CYP3A4P08684 503 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 MYCLP12524 364 aaPredicted RBP14.31□□□□□ -0.12
VMP1-202ENST00000585847 PTGS1P23219 599 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 CMA1P23946 247 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 CCND3P30281 292 aaPredicted RBP14.31□□□□□ -0.12
VMP1-202ENST00000585847 PRPHP41219 470 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 ARHGAP4P98171 946 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 ACVR2BQ13705 512 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 PTPAQ15257 358 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 MTFR1Q15390 333 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 CCDC183Q5T5S1 534 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 MFSD14CQ5VZR4 134 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 EEPD1Q7L9B9 569 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 NEK8Q86SG6 692 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 CYP2W1Q8TAV3 490 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 TBCKQ8TEA7 893 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 MRPS27Q92552 414 aaKnown RBP14.31□□□□□ -0.12
VMP1-202ENST00000585847 UBIAD1Q9Y5Z9 338 aa14.31□□□□□ -0.12
VMP1-202ENST00000585847 CEP290O15078 2479 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 FAM237AA0A1B0GTK4 181 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 FAM86B1E9PN63 330 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 ARIH2O95376 493 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 FAM86B2P0C5J1 330 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 ITGB5P18084 799 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 CCND2P30279 289 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 CIITAP33076 1130 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 ATP2C1P98194 919 aaPredicted RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 FAM160A1Q05DH4 1040 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 PDE4DQ08499 809 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 INF2Q27J81 1249 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 FOXD4L6Q3SYB3 417 aaPredicted RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 PPP4R3AQ6IN85 833 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 FAM173BQ6P4H8 233 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 FOXD4L3Q6VB84 417 aaPredicted RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 CHRDL2Q6WN34 429 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 PIK3AP1Q6ZUJ8 805 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 ELOA2Q8IYF1 753 aaPredicted RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 INPP4AQ96PE3 977 aaPredicted RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 ABHD16BQ9H3Z7 469 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 VTA1Q9NP79 307 aa14.3□□□□□ -0.12
VMP1-202ENST00000585847 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 SRPRBQ9Y5M8 271 aaKnown RBP14.3□□□□□ -0.12
VMP1-202ENST00000585847 MYH15Q9Y2K3 1946 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 IGLV3-22A0A075B6J6 115 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 SLC26A4O43511 780 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 EIF3JO75822 258 aaKnown RBP14.29□□□□□ -0.12
VMP1-202ENST00000585847 USP11P51784 963 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 STXBP2Q15833 593 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 XRRA1Q6P2D8 792 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 CCDC62Q6P9F0 684 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 LENG9Q96B70 501 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 AK8Q96MA6 479 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 MBOAT7Q96N66 472 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 RAB34Q9BZG1 259 aa14.29□□□□□ -0.12
VMP1-202ENST00000585847 WDR11Q9BZH6 1224 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms