RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 DIAPH3Q9NSV4 1193 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 RAPGEFL1Q9UHV5 662 aa16.86■□□□□ 0.29
SDF2-202ENST00000585428 PALM3A6NDB9 673 aaPredicted RBP16.85■□□□□ 0.29
SDF2-202ENST00000585428 KLRF2D3W0D1 207 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 GJB5O95377 273 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 TGFB3P10600 412 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 DEFB103AP81534 67 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 ZNF200P98182 395 aaPredicted RBP16.85■□□□□ 0.29
SDF2-202ENST00000585428 SP2Q02086 613 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 HIC1Q14526 733 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 MFSD10Q14728 455 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 KIAA0753Q2KHM9 967 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 CELF3Q5SZQ8 465 aaKnown RBP16.85■□□□□ 0.29
SDF2-202ENST00000585428 KCNV1Q6PIU1 500 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 WNT8BQ93098 351 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 HLA-CQ95604 372 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 PDCD2LQ9BRP1 358 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 ALG1Q9BT22 464 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 MAD2L2Q9UI95 211 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 MRVI1Q9Y6F6 885 aa16.85■□□□□ 0.29
SDF2-202ENST00000585428 ZBTB5O15062 677 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 DHX16O60231 1041 aaKnown RBP16.84■□□□□ 0.29
SDF2-202ENST00000585428 IKBKEQ14164 716 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 MBTPS1Q14703 1052 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 HSDL1Q3SXM5 330 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 IFIT1BQ5T764 474 aaKnown RBP16.84■□□□□ 0.29
SDF2-202ENST00000585428 ZNF618Q5T7W0 954 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 UBAC1Q9BSL1 405 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 C16orf70Q9BSU1 422 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 ZBED2Q9BTP6 218 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 SUGCTQ9HAC7 445 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 PCDHA1Q9Y5I3 950 aa16.84■□□□□ 0.29
SDF2-202ENST00000585428 RBAK-RBAKDNI3L0D1 243 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 EFCAB14O75071 495 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 ERVK-21P61565 698 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 MKRN4PQ13434 485 aaPredicted RBP16.83■□□□□ 0.28
SDF2-202ENST00000585428 PGM5Q15124 567 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 SLC35G1Q2M3R5 365 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 CYB5R4Q7L1T6 521 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 C1QTNF1Q9BXJ1 281 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 IL25Q9H293 177 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 RIOX1Q9H6W3 641 aa16.83■□□□□ 0.28
SDF2-202ENST00000585428 TET1Q8NFU7 2136 aa16.82■□□□□ 0.28
SDF2-202ENST00000585428 ZNF286BP0CG31 522 aa16.82■□□□□ 0.28
SDF2-202ENST00000585428 MYCLP12524 364 aaPredicted RBP16.82■□□□□ 0.28
SDF2-202ENST00000585428 HOXA13P31271 388 aaPredicted RBP16.82■□□□□ 0.28
SDF2-202ENST00000585428 SPATA33Q96N06 139 aa16.82■□□□□ 0.28
SDF2-202ENST00000585428 PRRC2BQ5JSZ5 2229 aaKnown RBP16.81■□□□□ 0.28
SDF2-202ENST00000585428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.81■□□□□ 0.28
SDF2-202ENST00000585428 LINC01553A4QN01 128 aa16.81■□□□□ 0.28
SDF2-202ENST00000585428 HOXC8P31273 242 aa16.81■□□□□ 0.28
SDF2-202ENST00000585428 SERINC5Q86VE9 423 aa16.81■□□□□ 0.28
SDF2-202ENST00000585428 IL31RAQ8NI17 732 aa16.81■□□□□ 0.28
SDF2-202ENST00000585428 TGS1Q96RS0 853 aaKnown RBP16.81■□□□□ 0.28
SDF2-202ENST00000585428 BCAS3Q9H6U6 928 aa16.81■□□□□ 0.28
SDF2-202ENST00000585428 LGR5O75473 907 aa16.8■□□□□ 0.28
SDF2-202ENST00000585428 GGPS1O95749 300 aa16.8■□□□□ 0.28
SDF2-202ENST00000585428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
SDF2-202ENST00000585428 DBF4BQ8NFT6 615 aa16.8■□□□□ 0.28
SDF2-202ENST00000585428 GPKOWQ92917 476 aaPredicted RBP eCLIP16.8■□□□□ 0.28
SDF2-202ENST00000585428 EPHX3Q9H6B9 360 aa16.8■□□□□ 0.28
SDF2-202ENST00000585428 INSL6Q9Y581 213 aa16.8■□□□□ 0.28
SDF2-202ENST00000585428 RSPH10B2B2RC85 870 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 H3BRB1 525 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 GCOM1H8Y6P7 765 aaPredicted RBP16.79■□□□□ 0.28
SDF2-202ENST00000585428 CYTH3O43739 400 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 SORBS3O60504 671 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 RSPH10BP0C881 870 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 POLR2MP0CAP2 368 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 UBA1P22314 1058 aaKnown RBP16.79■□□□□ 0.28
SDF2-202ENST00000585428 HTRA4P83105 476 aaPredicted RBP16.79■□□□□ 0.28
SDF2-202ENST00000585428 TRAF1Q13077 416 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 GDPD5Q8WTR4 605 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 ZFP91Q96JP5 570 aaPredicted RBP16.79■□□□□ 0.28
SDF2-202ENST00000585428 PIGSQ96S52 555 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 RNPEPQ9H4A4 650 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 TUT1Q9H6E5 874 aaKnown RBP16.79■□□□□ 0.28
SDF2-202ENST00000585428 MLXIPQ9HAP2 919 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 BDP1A6H8Y1 2624 aa16.79■□□□□ 0.28
SDF2-202ENST00000585428 TRIP12Q14669 1992 aaPredicted RBP16.78■□□□□ 0.28
SDF2-202ENST00000585428 EMSYQ7Z589 1322 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 PNMA6FA0A0J9YX94 578 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 CCND2P30279 289 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 THPOP40225 353 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 MRPS9P82933 396 aaKnown RBP16.78■□□□□ 0.28
SDF2-202ENST00000585428 TROAPQ12815 778 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 GRM4Q14833 912 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 PLEKHG4Q58EX7 1191 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 EXOC6Q8TAG9 804 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 SENP2Q9HC62 589 aa16.78■□□□□ 0.28
SDF2-202ENST00000585428 TCF20Q9UGU0 1960 aaKnown RBP16.77■□□□□ 0.28
SDF2-202ENST00000585428 C17orf102A2RUQ5 167 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 SPATA31C2B4DYI2 1134 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 CYP21A2P08686 494 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 ICAM3P32942 547 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 FAM117BQ6P1L5 589 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 FCHSD1Q86WN1 690 aa16.77■□□□□ 0.28
SDF2-202ENST00000585428 SP7Q8TDD2 431 aaPredicted RBP16.77■□□□□ 0.28
SDF2-202ENST00000585428 KHSRPQ92945 711 aaKnown RBP eCLIP16.77■□□□□ 0.28
SDF2-202ENST00000585428 ATP6V0A1Q93050 837 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms