RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 MYCLP12524 364 aaPredicted RBP12.11□□□□□ -0.47
CASC3-210ENST00000584997 RRP1P56182 461 aaKnown RBP12.11□□□□□ -0.47
CASC3-210ENST00000584997 ZNF200P98182 395 aaPredicted RBP12.11□□□□□ -0.47
CASC3-210ENST00000584997 TCTN1Q2MV58 587 aa12.11□□□□□ -0.47
CASC3-210ENST00000584997 MYOCDQ8IZQ8 938 aa12.11□□□□□ -0.47
CASC3-210ENST00000584997 FBXO22Q8NEZ5 403 aa12.11□□□□□ -0.47
CASC3-210ENST00000584997 ZSCAN10Q96SZ4 725 aaPredicted RBP12.11□□□□□ -0.47
CASC3-210ENST00000584997 LNPKQ9C0E8 428 aa12.11□□□□□ -0.47
CASC3-210ENST00000584997 UBE2ZQ9H832 354 aaPredicted RBP12.11□□□□□ -0.47
CASC3-210ENST00000584997 INSL6Q9Y581 213 aa12.11□□□□□ -0.47
CASC3-210ENST00000584997 MUC6Q6W4X9 2439 aa12.11□□□□□ -0.47
CASC3-210ENST00000584997 FAM86C2PA6NEL3 165 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 GPR37L1O60883 481 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 AMHP03971 560 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 SDSP20132 328 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 KCNA5P22460 613 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 HOXD11P31277 338 aaPredicted RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 THPOP40225 353 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 HDAC1Q13547 482 aaPredicted RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 IMMTQ16891 758 aaKnown RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 TRIM71Q2Q1W2 868 aaKnown RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 KCNV1Q6PIU1 500 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 CWC27Q6UX04 472 aaKnown RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 ENAHQ8N8S7 591 aaPredicted RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 ANKS1AQ92625 1134 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 KHSRPQ92945 711 aaKnown RBP eCLIP12.1□□□□□ -0.471e-8■□□□□ 8.7
CASC3-210ENST00000584997 WNT8BQ93098 351 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 SPATA33Q96N06 139 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 PDCD2LQ9BRP1 358 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 C17orf80Q9BSJ5 609 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 AMNQ9BXJ7 453 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 JMJD4Q9H9V9 463 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 DIAPH3Q9NSV4 1193 aa12.1□□□□□ -0.47
CASC3-210ENST00000584997 ARIH1Q9Y4X5 557 aaPredicted RBP12.1□□□□□ -0.47
CASC3-210ENST00000584997 PIEZO1Q92508 2521 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 NLRC5Q86WI3 1866 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 RSPH10B2B2RC85 870 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 PPFIA4O75335 1185 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 GGPS1O95749 300 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 RSPH10BP0C881 870 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 SSTR3P32745 418 aaPredicted RBP12.09□□□□□ -0.47
CASC3-210ENST00000584997 HSD17B4P51659 736 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 MBTPS1Q14703 1052 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 HSDL1Q3SXM5 330 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 LEXMQ3ZCV2 418 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 CELF3Q5SZQ8 465 aaKnown RBP12.09□□□□□ -0.47
CASC3-210ENST00000584997 MYSM1Q5VVJ2 828 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.09□□□□□ -0.47
CASC3-210ENST00000584997 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 KRT23Q9C075 422 aa12.09□□□□□ -0.47
CASC3-210ENST00000584997 BAZ2BQ9UIF8 2168 aaKnown RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 C17orf102A2RUQ5 167 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 PI4K2BG5E9Z4 385 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 ZBTB5O15062 677 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 HOXD8P13378 290 aaPredicted RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 UBA1P22314 1058 aaKnown RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 HOXA13P31271 388 aaPredicted RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 PGM5Q15124 567 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 PTPROQ16827 1216 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 IFIT1BQ5T764 474 aaKnown RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 GJD3Q8N144 294 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 STAG2Q8N3U4 1231 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 ATP6V0A1Q93050 837 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 MRPL38Q96DV4 380 aaKnown RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 CNNM2Q9H8M5 875 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 MLXIPQ9HAP2 919 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 CD320Q9NPF0 282 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 C11orf16Q9NQ32 467 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 MAP3K20Q9NYL2 800 aaKnown RBP12.08□□□□□ -0.48
CASC3-210ENST00000584997 ZSWIM5Q9P217 1185 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 CTNNA3Q9UI47 895 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 PCDHA1Q9Y5I3 950 aa12.08□□□□□ -0.48
CASC3-210ENST00000584997 KLRF2D3W0D1 207 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 RBAK-RBAKDNI3L0D1 243 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 HIP1O00291 1037 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 OPLAHO14841 1288 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 RGS20O76081 388 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 CCND2P30279 289 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 GHRHRQ02643 423 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 HIC1Q14526 733 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 TIGD5Q53EQ6 642 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 PTCRAQ6ISU1 281 aaPredicted RBP12.07□□□□□ -0.48
CASC3-210ENST00000584997 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 EP400NLQ6ZTU2 488 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 STOX1Q6ZVD7 989 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 HOMER1Q86YM7 354 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 FAM178BQ8IXR5 827 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 SAMD3Q8N6K7 520 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 IL31RAQ8NI17 732 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.07□□□□□ -0.48
CASC3-210ENST00000584997 SEPT8Q92599 483 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 KAT6AQ92794 2004 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 SAMD11Q96NU1 681 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 YME1L1Q96TA2 773 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 DSCC1Q9BVC3 393 aa12.07□□□□□ -0.48
CASC3-210ENST00000584997 MYO7AQ13402 2215 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms