RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 CLK2P49760 499 aaKnown RBP15.77■□□□□ 0.12
TRAF4-215ENST00000584944 MTMR1Q13613 665 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 ANO1Q5XXA6 986 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 IL31RAQ8NI17 732 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 TBCKQ8TEA7 893 aa15.77■□□□□ 0.12
TRAF4-215ENST00000584944 NAP1L4Q99733 375 aaKnown RBP15.77■□□□□ 0.12
TRAF4-215ENST00000584944 NOL7Q9UMY1 257 aaKnown RBP15.77■□□□□ 0.12
TRAF4-215ENST00000584944 FRMPD4Q14CM0 1322 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 FRMPD3Q5JV73 1810 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 BTBD18B2RXH4 712 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 KBTBD13C9JR72 458 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 TGFB3P10600 412 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 INF2Q27J81 1249 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 LRRC26Q2I0M4 334 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 CEP55Q53EZ4 464 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 RNF180Q86T96 592 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 GIMAP8Q8ND71 665 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-215ENST00000584944 TRPV1Q8NER1 839 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 ZFP91Q96JP5 570 aaPredicted RBP15.76■□□□□ 0.11
TRAF4-215ENST00000584944 PDGFCQ9NRA1 345 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 COL6A3P12111 3177 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 DNAH12Q6ZR08 3092 aa15.76■□□□□ 0.11
TRAF4-215ENST00000584944 MAFGO15525 162 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 ZEB2O60315 1214 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 DUSP11O75319 330 aaKnown RBP15.75■□□□□ 0.11
TRAF4-215ENST00000584944 C6orf222P0C671 652 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-215ENST00000584944 PDIA4P13667 645 aaKnown RBP15.75■□□□□ 0.11
TRAF4-215ENST00000584944 USP11P51784 963 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 SETQ01105 290 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-215ENST00000584944 NR5A1Q13285 461 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 LETM2Q2VYF4 491 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 GPR153Q6NV75 609 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 NEK8Q86SG6 692 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 TLK2Q86UE8 772 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 DHX37Q8IY37 1157 aaKnown RBP15.75■□□□□ 0.11
TRAF4-215ENST00000584944 OXER1Q8TDS5 423 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 GPRASP2Q96D09 838 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 FOXP1Q9H334 677 aaPredicted RBP15.75■□□□□ 0.11
TRAF4-215ENST00000584944 MLXIPQ9HAP2 919 aa15.75■□□□□ 0.11
TRAF4-215ENST00000584944 NOP56O00567 594 aaKnown RBP15.74■□□□□ 0.11
TRAF4-215ENST00000584944 DYNC1LI2O43237 492 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-215ENST00000584944 GH1P01241 217 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 ATP2B1P20020 1258 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 CPT1AP50416 773 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 NEDD9Q14511 834 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 LRIT3Q3SXY7 679 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 DUSP28Q4G0W2 176 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 PRR16Q569H4 304 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 TAPT1Q6NXT6 567 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 PLA2G4DQ86XP0 818 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 NOSTRINQ8IVI9 506 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 TDHQ8IZJ6 230 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 OR6J1Q8NGC5 347 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 INPP4AQ96PE3 977 aaPredicted RBP15.74■□□□□ 0.11
TRAF4-215ENST00000584944 MXRA8Q9BRK3 442 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 SDF4Q9BRK5 362 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 PKD2L1Q9P0L9 805 aa15.74■□□□□ 0.11
TRAF4-215ENST00000584944 CCNT1O60563 726 aaKnown RBP15.73■□□□□ 0.11
TRAF4-215ENST00000584944 PGK1P00558 417 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 CYP3A4P08684 503 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 GCFC2P16383 781 aaKnown RBP15.73■□□□□ 0.11
TRAF4-215ENST00000584944 SMPD1P17405 629 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 MRPS9P82933 396 aaKnown RBP15.73■□□□□ 0.11
TRAF4-215ENST00000584944 LAMC2Q13753 1193 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 LY6KQ17RY6 165 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 GNASQ5JWF2 1037 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 PCSK9Q8NBP7 692 aaKnown RBP15.73■□□□□ 0.11
TRAF4-215ENST00000584944 VTI1AQ96AJ9 217 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 JADE2Q9NQC1 790 aa15.73■□□□□ 0.11
TRAF4-215ENST00000584944 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-215ENST00000584944 SPATA31C2B4DYI2 1134 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 GGPS1O95749 300 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 ITGB5P18084 799 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 NIPA1Q7RTP0 329 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 LENG1Q96BZ8 264 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-215ENST00000584944 SPATA33Q96N06 139 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 ZNF577Q9BSK1 485 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 UBE2OQ9C0C9 1292 aaKnown RBP15.72■□□□□ 0.11
TRAF4-215ENST00000584944 SENP6Q9GZR1 1112 aaPredicted RBP15.72■□□□□ 0.11
TRAF4-215ENST00000584944 KATNBL1Q9H079 304 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 KCNH7Q9NS40 1196 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 DDX25Q9UHL0 483 aaKnown RBP15.72■□□□□ 0.11
TRAF4-215ENST00000584944 Q9Y3F1 56 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 UBIAD1Q9Y5Z9 338 aa15.72■□□□□ 0.11
TRAF4-215ENST00000584944 SYNRGQ9UMZ2 1314 aa15.71■□□□□ 0.11
TRAF4-215ENST00000584944 RBM47A0AV96 593 aaKnown RBP15.71■□□□□ 0.11
TRAF4-215ENST00000584944 ADAMTS3O15072 1205 aa15.71■□□□□ 0.11
TRAF4-215ENST00000584944 SORBS3O60504 671 aa15.71■□□□□ 0.11
TRAF4-215ENST00000584944 BAG4O95429 457 aaKnown RBP15.71■□□□□ 0.11
TRAF4-215ENST00000584944 SP4Q02446 784 aa15.71■□□□□ 0.11
TRAF4-215ENST00000584944 NPY5RQ15761 445 aa15.71■□□□□ 0.11
TRAF4-215ENST00000584944 FSCN1Q16658 493 aaKnown RBP15.71■□□□□ 0.11
TRAF4-215ENST00000584944 DDX41Q9UJV9 622 aaKnown RBP15.71■□□□□ 0.11
TRAF4-215ENST00000584944 MCM3APO60318 1980 aa15.7■□□□□ 0.1
TRAF4-215ENST00000584944 M0R2N6 131 aa15.7■□□□□ 0.1
TRAF4-215ENST00000584944 IPO5O00410 1097 aaKnown RBP15.7■□□□□ 0.1
TRAF4-215ENST00000584944 DNM1LO00429 736 aa15.7■□□□□ 0.1
TRAF4-215ENST00000584944 MEIS1O00470 390 aa15.7■□□□□ 0.1
TRAF4-215ENST00000584944 STX6O43752 255 aa15.7■□□□□ 0.1
TRAF4-215ENST00000584944 SYT1P21579 422 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms