RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 CYP3A7P24462 503 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 INPP5BP32019 993 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 GNAQP50148 359 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 HSD17B4P51659 736 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 TROAPQ12815 778 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 PABPC4Q13310 644 aaKnown RBP eCLIP3.54□□□□□ -1.84
CCDC178-213ENST00000583930 NTRK3Q16288 839 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 GPR162Q16538 588 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 C1orf53Q5VUE5 145 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 CATSPERGQ6ZRH7 1159 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 ZNF662Q6ZS27 426 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 STOX1Q6ZVD7 989 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 DHX32Q7L7V1 743 aaKnown RBP3.54□□□□□ -1.84
CCDC178-213ENST00000583930 TBC1D10CQ8IV04 446 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 STAG2Q8N3U4 1231 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 RNF34Q969K3 372 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 DRC1Q96MC2 740 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 ZFP42Q96MM3 310 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 LNPKQ9C0E8 428 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 SIL1Q9H173 461 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 UPF3AQ9H1J1 476 aaKnown RBP3.54□□□□□ -1.84
CCDC178-213ENST00000583930 CHRDQ9H2X0 955 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 VCPKMTQ9H867 229 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 IL17RBQ9NRM6 502 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 DNMT3LQ9UJW3 386 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 TLR6Q9Y2C9 796 aa3.54□□□□□ -1.84
CCDC178-213ENST00000583930 FAM237AA0A1B0GTK4 181 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 MINDY4BA8MYZ0 360 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 ST8SIA5O15466 376 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SPINT1O43278 529 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 XYLBO75191 536 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 DDNO94850 711 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 TTLL1O95922 423 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 USP17L7P0C7H9 530 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 CETPP11597 493 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 HSPA6P17066 643 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SCP2P22307 547 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 ECE1P42892 770 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 OS9Q13438 667 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 GNASQ5JWF2 1037 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 CNNM4Q6P4Q7 775 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 VPS37DQ86XT2 251 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 DHX37Q8IY37 1157 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 AMOTL1Q8IY63 956 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 TTC16Q8NEE8 873 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 NCOA7Q8NI08 942 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 ESR2Q92731 530 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 JARID2Q92833 1246 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 TNFRSF25Q93038 417 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SENP7Q9BQF6 1050 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 FSD1Q9BTV5 496 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 IGFLR1Q9H665 355 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 IL1RAPL2Q9NP60 686 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 GGA3Q9NZ52 723 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 LRP2BPQ9P2M1 347 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 RBM8AQ9Y5S9 174 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 MRVI1Q9Y6F6 885 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 ABCB11O95342 1321 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 NEDD4P46934 1319 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SYNGAP1Q96PV0 1343 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 A0A1W2PNR3 127 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 PRPF3O43395 683 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 CPNE3O75131 537 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SLC25A27O95847 323 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 IFNAR1P17181 557 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 VAMP1P23763 118 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 HOXC8P31273 242 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 ICAM3P32942 547 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 BACE1P56817 501 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 TYRO3Q06418 890 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 RBL2Q08999 1139 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SFSWAPQ12872 951 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 NOGQ13253 232 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 TOB2Q14106 344 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 RASA3Q14644 834 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 RRP1BQ14684 758 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 PKN2Q16513 984 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 NBPF9Q3BBW0 867 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 C17orf99Q6UX52 265 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 USP48Q86UV5 1035 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 RIOX2Q8IUF8 465 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 CHST13Q8NET6 341 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 FAM227BQ96M60 508 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 NSUN5Q96P11 429 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 ZIC5Q96T25 663 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 NAP1L4Q99733 375 aaKnown RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 RNF26Q9BY78 433 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 BCO2Q9BYV7 579 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 GBA2Q9HCG7 927 aaPredicted RBP3.53□□□□□ -1.84
CCDC178-213ENST00000583930 BRD7Q9NPI1 651 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 DIAPH3Q9NSV4 1193 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 SLC4A4Q9Y6R1 1079 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 CNTNAP5Q8WYK1 1306 aa3.53□□□□□ -1.84
CCDC178-213ENST00000583930 FAM187AA6NFU0 413 aa3.52□□□□□ -1.85
CCDC178-213ENST00000583930 CCDC85CA6NKD9 419 aa3.52□□□□□ -1.85
CCDC178-213ENST00000583930 CST5P28325 142 aaPredicted RBP3.52□□□□□ -1.85
CCDC178-213ENST00000583930 MSX1P28360 303 aa3.52□□□□□ -1.85
CCDC178-213ENST00000583930 MCM5P33992 734 aa3.52□□□□□ -1.85
CCDC178-213ENST00000583930 NF2P35240 595 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms