RNA–Protein interactions for RNA: ENST00000583821.1

MSI2-218, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 548 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-218ENST00000583821 POLR3EQ9NVU0 708 aa9.47□□□□□ -0.89
MSI2-218ENST00000583821 Q9Y3F1 56 aa9.47□□□□□ -0.89
MSI2-218ENST00000583821 CENPBP07199 599 aaPredicted RBP9.46□□□□□ -0.9
MSI2-218ENST00000583821 CPT1AP50416 773 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 NUCB1Q02818 461 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 RAB30Q15771 203 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 ADGRF4Q8IZF3 695 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 ENAHQ8N8S7 591 aaPredicted RBP9.46□□□□□ -0.9
MSI2-218ENST00000583821 SCFD2Q8WU76 684 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 TTC14Q96N46 770 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 TAAR1Q96RJ0 339 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 GAS2L1Q99501 681 aaPredicted RBP9.46□□□□□ -0.9
MSI2-218ENST00000583821 MTG1Q9BT17 334 aaPredicted RBP9.46□□□□□ -0.9
MSI2-218ENST00000583821 RNF41Q9H4P4 317 aaPredicted RBP9.46□□□□□ -0.9
MSI2-218ENST00000583821 MSRAQ9UJ68 235 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 MICAL3Q7RTP6 2002 aa9.46□□□□□ -0.9
MSI2-218ENST00000583821 SIP14410 1827 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 LOC102724159A0A0B4J2E5 919 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 A6NJR5 290 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 TULP1O00294 542 aaPredicted RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 ZNF213O14771 459 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 DHX16O60231 1041 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 SORBS3O60504 671 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 ARHGEF15O94989 841 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 PCP11498 1178 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 IGFBP4P22692 258 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 MFAP1P55081 439 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 ARHGAP1Q07960 439 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 PWP2Q15269 919 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 LY6KQ17RY6 165 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 QRICH1Q2TAL8 776 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 GPATCH4Q5T3I0 446 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 THSD4Q6ZMP0 1018 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 SEPT14Q6ZU15 432 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 CHST3Q7LGC8 479 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 SPRED2Q7Z698 418 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 DNERQ8NFT8 737 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 SYTL5Q8TDW5 730 aaPredicted RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 AFG1LQ8WV93 481 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 ZSCAN10Q96SZ4 725 aaPredicted RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 MTIF3Q9H2K0 278 aaKnown RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 RWDD1Q9H446 243 aaPredicted RBP9.45□□□□□ -0.9
MSI2-218ENST00000583821 OSBPL3Q9H4L5 887 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 KAT14Q9H8E8 782 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 JMJD4Q9H9V9 463 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 VAT1LQ9HCJ6 419 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 SLC4A7Q9Y6M7 1214 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 ABCB11O95342 1321 aa9.45□□□□□ -0.9
MSI2-218ENST00000583821 EPOPA6NHQ4 379 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 RFXAPO00287 272 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 OPLAHO14841 1288 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 PPP1R11O60927 126 aaPredicted RBP9.44□□□□□ -0.9
MSI2-218ENST00000583821 MMP3P08254 477 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 ATP2A2P16615 1042 aaKnown RBP9.44□□□□□ -0.9
MSI2-218ENST00000583821 EIF2AK2P19525 551 aaKnown RBP9.44□□□□□ -0.9
MSI2-218ENST00000583821 SLC35G1Q2M3R5 365 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 TJAP1Q5JTD0 557 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 CCDC62Q6P9F0 684 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 CYB5R4Q7L1T6 521 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 LAPTM4BQ86VI4 370 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 DGKHQ86XP1 1220 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 TICAM2Q86XR7 235 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 STAG2Q8N3U4 1231 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 CTAGE1Q96RT6 745 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 CERS4Q9HA82 394 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 SLC28A3Q9HAS3 691 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 ZSWIM5Q9P217 1185 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 TAF6LQ9Y6J9 622 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 RAD50Q92878 1312 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 NLRC5Q86WI3 1866 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 ATG2AQ2TAZ0 1938 aa9.44□□□□□ -0.9
MSI2-218ENST00000583821 NKRFO15226 690 aaKnown RBP eCLIP9.43□□□□□ -0.9
MSI2-218ENST00000583821 CA3P07451 260 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 PARP1P09874 1014 aaKnown RBP9.43□□□□□ -0.9
MSI2-218ENST00000583821 SUPT20HL2P0C7V6 817 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 ZNF286BP0CG31 522 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 TCTN1Q2MV58 587 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 ASPRV1Q53RT3 343 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 KRT40Q6A162 431 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 GDF6Q6KF10 455 aaPredicted RBP9.43□□□□□ -0.9
MSI2-218ENST00000583821 TMCO2Q7Z6W1 182 aaPredicted RBP9.43□□□□□ -0.9
MSI2-218ENST00000583821 IQCA1Q86XH1 822 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 FBXO11Q86XK2 927 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 RPUSD2Q8IZ73 545 aaKnown RBP9.43□□□□□ -0.9
MSI2-218ENST00000583821 RGS22Q8NE09 1264 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 ANKK1Q8NFD2 765 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 IL31RAQ8NI17 732 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 DHX38Q92620 1227 aaKnown RBP9.43□□□□□ -0.9
MSI2-218ENST00000583821 ANKS1AQ92625 1134 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 KAT2BQ92831 832 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 RMDN3Q96TC7 470 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 MPHOSPH6Q99547 160 aaKnown RBP9.43□□□□□ -0.9
MSI2-218ENST00000583821 SEZ6LQ9BYH1 1024 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 SENP2Q9HC62 589 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 THEGQ9P2T0 379 aa9.43□□□□□ -0.9
MSI2-218ENST00000583821 PNMA2Q9UL42 364 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 296.8 ms