RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 DHX16O60231 1041 aaKnown RBP23.8■■□□□ 1.4
SRSF1-206ENST00000583741 EIF3JO75822 258 aaKnown RBP23.8■■□□□ 1.4
SRSF1-206ENST00000583741 GJB5O95377 273 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 NR3C2P08235 984 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 MBTPS1Q14703 1052 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 MFSD10Q14728 455 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 KIAA0753Q2KHM9 967 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 TRIM71Q2Q1W2 868 aaKnown RBP23.8■■□□□ 1.4
SRSF1-206ENST00000583741 CCDC178Q5BJE1 867 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 CWC27Q6UX04 472 aaKnown RBP23.8■■□□□ 1.4
SRSF1-206ENST00000583741 PPTC7Q8NI37 304 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 DIAPH3Q9NSV4 1193 aa23.8■■□□□ 1.4
SRSF1-206ENST00000583741 PARNO95453 639 aaKnown RBP23.79■■□□□ 1.4
SRSF1-206ENST00000583741 CFBP00751 764 aa23.79■■□□□ 1.4
SRSF1-206ENST00000583741 PARP1P09874 1014 aaKnown RBP23.79■■□□□ 1.4
SRSF1-206ENST00000583741 ZNF200P98182 395 aaPredicted RBP23.79■■□□□ 1.4
SRSF1-206ENST00000583741 HIC1Q14526 733 aa23.79■■□□□ 1.4
SRSF1-206ENST00000583741 ZSWIM5Q9P217 1185 aa23.79■■□□□ 1.4
SRSF1-206ENST00000583741 MICAL3Q7RTP6 2002 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 RGS20O76081 388 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 NT5C2P49902 561 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 HSD17B4P51659 736 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 PTK7Q13308 1070 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 LAMC2Q13753 1193 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 ZNF618Q5T7W0 954 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 KATNAL1Q9BW62 490 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 SUGCTQ9HAC7 445 aa23.78■■□□□ 1.4
SRSF1-206ENST00000583741 ABHD14A-ACY1A0A1B0GW23 586 aa23.77■■□□□ 1.4
SRSF1-206ENST00000583741 SORBS3O60504 671 aa23.77■■□□□ 1.4
SRSF1-206ENST00000583741 EIF5BO60841 1220 aaKnown RBP23.77■■□□□ 1.4
SRSF1-206ENST00000583741 SEC24BO95487 1268 aa23.77■■□□□ 1.4
SRSF1-206ENST00000583741 HOXD8P13378 290 aaPredicted RBP23.77■■□□□ 1.4
SRSF1-206ENST00000583741 DHX37Q8IY37 1157 aaKnown RBP23.77■■□□□ 1.4
SRSF1-206ENST00000583741 STAG2Q8N3U4 1231 aa23.77■■□□□ 1.4
SRSF1-206ENST00000583741 KHSRPQ92945 711 aaKnown RBP eCLIP23.77■■□□□ 1.41e-17■■■□□ 15.3
SRSF1-206ENST00000583741 RAD9AQ99638 391 aa23.77■■□□□ 1.4
SRSF1-206ENST00000583741 LINC01553A4QN01 128 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 PPP1R11O60927 126 aaPredicted RBP23.76■■□□□ 1.39
SRSF1-206ENST00000583741 ERVK-21P61565 698 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 GHRHRQ02643 423 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 FAM117BQ6P1L5 589 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 FAM122AQ96E09 287 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 PDCD2LQ9BRP1 358 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 LMCD1Q9NZU5 365 aa23.76■■□□□ 1.39
SRSF1-206ENST00000583741 HSDL1Q3SXM5 330 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 IL31RAQ8NI17 732 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 TGS1Q96RS0 853 aaKnown RBP23.75■■□□□ 1.39
SRSF1-206ENST00000583741 ESYT1Q9BSJ8 1104 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 LRFN3Q9BTN0 628 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 AMNQ9BXJ7 453 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 MYCLP12524 364 aaPredicted RBP23.75■■□□□ 1.39
SRSF1-206ENST00000583741 IKBKEQ14164 716 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 MYSM1Q5VVJ2 828 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 RUFY2Q8WXA3 655 aa23.75■■□□□ 1.39
SRSF1-206ENST00000583741 EFCAB14O75071 495 aa23.74■■□□□ 1.39
SRSF1-206ENST00000583741 HOXA13P31271 388 aaPredicted RBP23.74■■□□□ 1.39
SRSF1-206ENST00000583741 MKRN4PQ13434 485 aaPredicted RBP23.74■■□□□ 1.39
SRSF1-206ENST00000583741 IMMTQ16891 758 aaKnown RBP23.74■■□□□ 1.39
SRSF1-206ENST00000583741 CELF3Q5SZQ8 465 aaKnown RBP23.74■■□□□ 1.39
SRSF1-206ENST00000583741 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.74■■□□□ 1.394e-10■■■■■ 56.8
SRSF1-206ENST00000583741 MTMR8Q96EF0 704 aa23.74■■□□□ 1.39
SRSF1-206ENST00000583741 DSCC1Q9BVC3 393 aa23.74■■□□□ 1.39
SRSF1-206ENST00000583741 BAZ2BQ9UIF8 2168 aaKnown RBP23.73■■□□□ 1.39
SRSF1-206ENST00000583741 LGR5O75473 907 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 SP2Q02086 613 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 STOX1Q6ZVD7 989 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 GPKOWQ92917 476 aaPredicted RBP eCLIP23.73■■□□□ 1.39
SRSF1-206ENST00000583741 SPATA33Q96N06 139 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 UBAC1Q9BSL1 405 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 UPF2Q9HAU5 1272 aaKnown RBP23.73■■□□□ 1.39
SRSF1-206ENST00000583741 CD320Q9NPF0 282 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 TSHZ2Q9NRE2 1034 aa23.73■■□□□ 1.39
SRSF1-206ENST00000583741 PPFIA4O75335 1185 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 GGPS1O95749 300 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 UBA1P22314 1058 aaKnown RBP23.72■■□□□ 1.39
SRSF1-206ENST00000583741 PGM5Q15124 567 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 IFIT1BQ5T764 474 aaKnown RBP23.72■■□□□ 1.39
SRSF1-206ENST00000583741 SERINC5Q86VE9 423 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 VSIG10LQ86VR7 867 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 ZFP91Q96JP5 570 aaPredicted RBP23.72■■□□□ 1.39
SRSF1-206ENST00000583741 C17orf80Q9BSJ5 609 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 KRT23Q9C075 422 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 IL25Q9H293 177 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 C11orf16Q9NQ32 467 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 DOCK5Q9H7D0 1870 aa23.72■■□□□ 1.39
SRSF1-206ENST00000583741 KLRF2D3W0D1 207 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 ZBTB5O15062 677 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 SGSM2O43147 1006 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 SEC23AQ15436 765 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 SLC35G1Q2M3R5 365 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 DBF4BQ8NFT6 615 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 C16orf70Q9BSU1 422 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 UBE2ZQ9H832 354 aaPredicted RBP23.71■■□□□ 1.39
SRSF1-206ENST00000583741 MAD2L2Q9UI95 211 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 PCDHA1Q9Y5I3 950 aa23.71■■□□□ 1.39
SRSF1-206ENST00000583741 REC8O95072 547 aa23.7■■□□□ 1.38
SRSF1-206ENST00000583741 THPOP40225 353 aa23.7■■□□□ 1.38
SRSF1-206ENST00000583741 CNNM2Q9H8M5 875 aa23.7■■□□□ 1.38
SRSF1-206ENST00000583741 EMSYQ7Z589 1322 aa23.7■■□□□ 1.38
SRSF1-206ENST00000583741 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms