RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 IPO9Q96P70 1041 aaKnown RBP5.54□□□□□ -1.52
VAPA-206ENST00000583475 EPB41L1Q9H4G0 881 aa5.54□□□□□ -1.52
VAPA-206ENST00000583475 MRPS23Q9Y3D9 190 aaKnown RBP5.54□□□□□ -1.52
VAPA-206ENST00000583475 TCRBV5S2A0A599 114 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 HTRA3P83110 453 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 CAP1Q01518 475 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 CHRNA2Q15822 529 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 KIZQ2M2Z5 673 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 VMACQ2NL98 169 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
VAPA-206ENST00000583475 STEAP3Q658P3 488 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 MAMDC2Q7Z304 686 aaPredicted RBP5.53□□□□□ -1.52
VAPA-206ENST00000583475 NLGN1Q8N2Q7 840 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 FAM26EQ8N5C1 309 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 ARRDC4Q8NCT1 418 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 SMARCC2Q8TAQ2 1214 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.53□□□□□ -1.526e-64■■■■□ 23.9
VAPA-206ENST00000583475 NOX5Q96PH1 765 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 SYT3Q9BQG1 590 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 LNPKQ9C0E8 428 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 SLC6A20Q9NP91 592 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 ZNF652Q9Y2D9 606 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 FAN1Q9Y2M0 1017 aa5.53□□□□□ -1.52
VAPA-206ENST00000583475 FFAR3O14843 346 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 C8BP07358 591 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 COL6A2P12110 1019 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 BMS1Q14692 1282 aaKnown RBP5.52□□□□□ -1.53
VAPA-206ENST00000583475 FBLN7Q53RD9 439 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 ETV3LQ6ZN32 361 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 OTOP3Q7RTS5 596 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 FAM126BQ8IXS8 530 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 TP53I13Q8NBR0 393 aaPredicted RBP5.52□□□□□ -1.53
VAPA-206ENST00000583475 PIP4K2CQ8TBX8 421 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 THAP3Q8WTV1 239 aaPredicted RBP5.52□□□□□ -1.53
VAPA-206ENST00000583475 DDX11Q96FC9 970 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 KCNJ15Q99712 375 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 SMOC1Q9H4F8 434 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 PMF1-BGLAPU3KQ54 211 aa5.52□□□□□ -1.53
VAPA-206ENST00000583475 SOD2P04179 222 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 GRK2P25098 689 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 GRK3P35626 688 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 GABREP78334 506 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 NFE2L2Q16236 605 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 CR1LQ2VPA4 569 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 CCDC144BQ3MJ40 725 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 VWA3BQ502W6 1294 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 HABP4Q5JVS0 413 aaKnown RBP5.51□□□□□ -1.53
VAPA-206ENST00000583475 CD300LDQ6UXZ3 194 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 SAPCD2Q86UD0 394 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 LINC01356Q8N9X3 169 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 CLEC4DQ8WXI8 215 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 GORASP1Q9BQQ3 440 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 ZSWIM4Q9H7M6 989 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 IPPKQ9H8X2 491 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 PCDHB4Q9Y5E5 795 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 PCDHA8Q9Y5H6 950 aa5.51□□□□□ -1.53
VAPA-206ENST00000583475 FAM47E-STBD1D6RA91 191 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 AQP7O14520 342 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 NKRFO15226 690 aaKnown RBP eCLIP5.5□□□□□ -1.53
VAPA-206ENST00000583475 CYP2C8P10632 490 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 STAT5AP42229 794 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 DLX2Q07687 328 aaPredicted RBP5.5□□□□□ -1.53
VAPA-206ENST00000583475 C2orf27AQ580R0 203 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 LCE1DQ5T752 114 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 CYP4F22Q6NT55 531 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 RBM12BQ8IXT5 1001 aaKnown RBP5.5□□□□□ -1.53
VAPA-206ENST00000583475 LINC00482Q8N8I6 264 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 MARCH10Q8NA82 808 aaPredicted RBP5.5□□□□□ -1.53
VAPA-206ENST00000583475 ZSWIM2Q8NEG5 633 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 PCDH19Q8TAB3 1148 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 PHOSPHO1Q8TCT1 267 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 ZNF526Q8TF50 670 aaPredicted RBP5.5□□□□□ -1.53
VAPA-206ENST00000583475 SPATA6Q9NWH7 488 aaPredicted RBP5.5□□□□□ -1.53
VAPA-206ENST00000583475 MYOTQ9UBF9 498 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 ASH2LQ9UBL3 628 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 PCDHA9Q9Y5H5 950 aa5.5□□□□□ -1.53
VAPA-206ENST00000583475 CCDC163A0A0D9SF12 145 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.49□□□□□ -1.53
VAPA-206ENST00000583475 KRIT1O00522 736 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 WNT9AO14904 365 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 SLC27A2O14975 620 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 MAFKO60675 156 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 TRIM13O60858 407 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 CRTAMO95727 393 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 LRG1P02750 347 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 BMP7P18075 431 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 GUCY1A3Q02108 690 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 SPIRE1Q08AE8 756 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 PAK1Q13153 545 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 ADGRG2Q8IZP9 1017 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 GSTCDQ8NEC7 633 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 SLC7A14Q8TBB6 771 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 TOE1Q96GM8 510 aaKnown RBP5.49□□□□□ -1.53
VAPA-206ENST00000583475 ALG1Q9BT22 464 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 C11orf84Q9BUA3 381 aaPredicted RBP5.49□□□□□ -1.53
VAPA-206ENST00000583475 PDGFDQ9GZP0 370 aaPredicted RBP5.49□□□□□ -1.53
VAPA-206ENST00000583475 KANSL2Q9H9L4 492 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 SLC52A2Q9HAB3 445 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 PTCH2Q9Y6C5 1203 aa5.49□□□□□ -1.53
VAPA-206ENST00000583475 A0A1B0GTL3 188 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms