RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CATIPQ7Z7H3 387 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 MAP3K14Q99558 947 aa20.6■□□□□ 0.89
SNX11-212ENST00000583320 SCN10AQ9Y5Y9 1956 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 CCDC196A0A1B0GTZ2 297 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 LCHNA4D1U4 455 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 PI4K2BG5E9Z4 385 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 CCT2P78371 535 aaKnown RBP20.59■□□□□ 0.89
SNX11-212ENST00000583320 PURAQ00577 322 aaKnown RBP20.59■□□□□ 0.89
SNX11-212ENST00000583320 SLFN13Q68D06 897 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 IQSEC1Q6DN90 963 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 RASGRP2Q7LDG7 609 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 TMCO2Q7Z6W1 182 aaPredicted RBP20.59■□□□□ 0.89
SNX11-212ENST00000583320 NSUN7Q8NE18 718 aaKnown RBP20.59■□□□□ 0.89
SNX11-212ENST00000583320 TRERF1Q96PN7 1200 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 Q9Y3F1 56 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 KIF3AQ9Y496 699 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 WDFY4Q6ZS81 3184 aa20.59■□□□□ 0.89
SNX11-212ENST00000583320 GOLGA8AA7E2F4 631 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 CDKL5O76039 1030 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 ALAS1P13196 640 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 PDCP20941 246 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 GJB2P29033 226 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 GDPD5Q8WTR4 605 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 CYP39A1Q9NYL5 469 aa20.58■□□□□ 0.89
SNX11-212ENST00000583320 CPLX1O14810 134 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 NMT2O60551 498 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 CTDNEP1O95476 244 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 TROAPQ12815 778 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 RTN1Q16799 776 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 MICU3Q86XE3 530 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 RGS22Q8NE09 1264 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 PHOSPHO2Q8TCD6 241 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 MORC4Q8TE76 937 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 KAT14Q9H8E8 782 aa20.57■□□□□ 0.88
SNX11-212ENST00000583320 NCOA5Q9HCD5 579 aaKnown RBP20.57■□□□□ 0.88
SNX11-212ENST00000583320 RBM28Q9NW13 759 aaKnown RBP20.57■□□□□ 0.88
SNX11-212ENST00000583320 ISY1Q9ULR0 285 aaKnown RBP20.57■□□□□ 0.88
SNX11-212ENST00000583320 TTLL1O95922 423 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 MYL3P08590 195 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 IQCF3P0C7M6 154 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 SUPT20HL2P0C7V6 817 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 TOP1P11387 765 aaKnown RBP20.56■□□□□ 0.88
SNX11-212ENST00000583320 ACTN1P12814 892 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 STAT2P52630 851 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 DUSP28Q4G0W2 176 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 FANCBQ8NB91 859 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 VTA1Q9NP79 307 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 FAM217BQ9NTX9 383 aaPredicted RBP20.56■□□□□ 0.88
SNX11-212ENST00000583320 SYNPO2Q9UMS6 1093 aa20.56■□□□□ 0.88
SNX11-212ENST00000583320 RFC2P35250 354 aa20.55■□□□□ 0.88
SNX11-212ENST00000583320 NBPF20Q3BBV1 942 aa20.55■□□□□ 0.88
SNX11-212ENST00000583320 TKFCQ3LXA3 575 aa20.55■□□□□ 0.88
SNX11-212ENST00000583320 FAM47CQ5HY64 1035 aa20.55■□□□□ 0.88
SNX11-212ENST00000583320 FTOQ9C0B1 505 aaKnown RBP eCLIP20.55■□□□□ 0.88
SNX11-212ENST00000583320 PTPDC1A2A3K4 754 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 FDX1P10109 184 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 IFNAR1P17181 557 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 CDC27P30260 824 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 KIF5BP33176 963 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 NTRK3Q16288 839 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 NSMFQ6X4W1 530 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 PNMA1Q8ND90 353 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 TMEM47Q9BQJ4 181 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 POLR3EQ9NVU0 708 aa20.54■□□□□ 0.88
SNX11-212ENST00000583320 STK36Q9NRP7 1315 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 TRIOO75962 3097 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 PITPNM1O00562 1244 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 JAK2O60674 1132 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 BRD1O95696 1058 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 ADD1P35611 737 aaKnown RBP20.53■□□□□ 0.88
SNX11-212ENST00000583320 IKQ13123 557 aaPredicted RBP20.53■□□□□ 0.88
SNX11-212ENST00000583320 GPNMBQ14956 572 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 KCTD1Q719H9 257 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 FAM160B2Q86V87 743 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 FAM184AQ8NB25 1140 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 CTCFLQ8NI51 663 aaPredicted RBP20.53■□□□□ 0.88
SNX11-212ENST00000583320 GMCL1Q96IK5 515 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 MTG1Q9BT17 334 aaPredicted RBP20.53■□□□□ 0.88
SNX11-212ENST00000583320 MYL10Q9BUA6 226 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 WDR11Q9BZH6 1224 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 STX8Q9UNK0 236 aa20.53■□□□□ 0.88
SNX11-212ENST00000583320 RXRAP19793 462 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 SYT1P21579 422 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 GNAQP50148 359 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 WDR5P61964 334 aaKnown RBP20.52■□□□□ 0.88
SNX11-212ENST00000583320 DEFB103AP81534 67 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 GRM4Q14833 912 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 TCTN1Q2MV58 587 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 LARP1BQ659C4 914 aaKnown RBP20.52■□□□□ 0.88
SNX11-212ENST00000583320 RAB11FIP4Q86YS3 637 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 OR6J1Q8NGC5 347 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 UBE2ZQ9H832 354 aaPredicted RBP20.52■□□□□ 0.88
SNX11-212ENST00000583320 MTUS1Q9ULD2 1270 aa20.52■□□□□ 0.88
SNX11-212ENST00000583320 TRIP12Q14669 1992 aaPredicted RBP20.52■□□□□ 0.87
SNX11-212ENST00000583320 RBM47A0AV96 593 aaKnown RBP20.51■□□□□ 0.87
SNX11-212ENST00000583320 PRR33A8MZF0 331 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 KIF28PB7ZC32 967 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 STX6O43752 255 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 SLC1A4P43007 532 aa20.51■□□□□ 0.87
SNX11-212ENST00000583320 ALDH5A1P51649 535 aaPredicted RBP20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms