RNA–Protein interactions for RNA: ENST00000583013.1

KPNB1-213, Transcript of karyopherin subunit beta 1, humanhuman

TSL 3

Gene KPNB1, Length 742 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-213ENST00000583013 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 BEX3Q00994 111 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 WWC2Q6AWC2 1192 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 KCNV1Q6PIU1 500 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 USP17L6PQ6QN14 398 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 SEPT14Q6ZU15 432 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 HEATR3Q7Z4Q2 680 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 FCHSD1Q86WN1 690 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 SLC43A3Q8NBI5 491 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 OR6J1Q8NGC5 347 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 SMARCC2Q8TAQ2 1214 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 GPKOWQ92917 476 aaPredicted RBP eCLIP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 KHSRPQ92945 711 aaKnown RBP eCLIP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 EMID1Q96A84 441 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 ZNF274Q96GC6 653 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 GDF15Q99988 308 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 SEZ6LQ9BYH1 1024 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 UPF3BQ9BZI7 483 aaKnown RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 ALDH8A1Q9H2A2 487 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 PSTPIP2Q9H939 334 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 PDLIM7Q9NR12 457 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 BARHL2Q9NY43 387 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 RBM27Q9P2N5 1060 aaKnown RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 DDX41Q9UJV9 622 aaKnown RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 ZMYND8Q9ULU4 1186 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 NAP1L2Q9ULW6 460 aaPredicted RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 PCDHGA4Q9Y5G9 962 aa9.3□□□□□ -0.92
KPNB1-213ENST00000583013 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
KPNB1-213ENST00000583013 A0A1W2PPC1 479 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 ARVCFO00192 962 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 PRPF3O43395 683 aaKnown RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 KPNA6O60684 536 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 GH1P01241 217 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 MYCLP12524 364 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 IFNAR1P17181 557 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 SYN1P17600 705 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 BMP8BP34820 402 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 MAGEA10P43363 369 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 CDK7P50613 346 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 MRPS9P82933 396 aaKnown RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 PURAQ00577 322 aaKnown RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 TLE2Q04725 743 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 ARHGAP1Q07960 439 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 NTRK3Q16288 839 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 PFKFB3Q16875 520 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 LY6KQ17RY6 165 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 BRDTQ58F21 947 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 PCNX4Q63HM2 1172 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 XRRA1Q6P2D8 792 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 CXCL17Q6UXB2 119 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 PTCD2Q8WV60 388 aaKnown RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 COPS5Q92905 334 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 INPP4AQ96PE3 977 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 RNF26Q9BY78 433 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 GLT8D2Q9H1C3 349 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 PDRG1Q9NUG6 133 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 POLR3EQ9NVU0 708 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 MRVI1Q9Y6F6 885 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 V9GY48 417 aaPredicted RBP9.29□□□□□ -0.92
KPNB1-213ENST00000583013 SCN10AQ9Y5Y9 1956 aa9.29□□□□□ -0.92
KPNB1-213ENST00000583013 ESYT2A0FGR8 921 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 PQBP1O60828 265 aaKnown RBP9.28□□□□□ -0.92
KPNB1-213ENST00000583013 MMP3P08254 477 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 CLTBP09497 229 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 TGFB3P10600 412 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 SCG2P13521 617 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 ICAM3P32942 547 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 NAPAP54920 295 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 FAAP100Q0VG06 881 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 PKN1Q16512 942 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 UBE2SQ16763 222 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 GNPTABQ3T906 1256 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 C8orf34Q49A92 452 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 HABP4Q5JVS0 413 aaKnown RBP9.28□□□□□ -0.92
KPNB1-213ENST00000583013 FAM126BQ8IXS8 530 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 NCOA5Q9HCD5 579 aaKnown RBP9.28□□□□□ -0.92
KPNB1-213ENST00000583013 RIC8AQ9NPQ8 531 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 PRKAG2Q9UGJ0 569 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 GRIN2DO15399 1336 aa9.28□□□□□ -0.92
KPNB1-213ENST00000583013 MYH7BA7E2Y1 1941 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 SPDYE3A6NKU9 549 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 DCDC2CA8MYV0 355 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 KIAA0355O15063 1070 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 FIBPO43427 364 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 HOXD8P13378 290 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-213ENST00000583013 UBA1P22314 1058 aaKnown RBP9.27□□□□□ -0.93
KPNB1-213ENST00000583013 CLK2P49760 499 aaKnown RBP9.27□□□□□ -0.93
KPNB1-213ENST00000583013 ADCY7P51828 1080 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 AP3B2Q13367 1082 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 ITGA7Q13683 1181 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 LAMC2Q13753 1193 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 ANKRD1Q15327 319 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 CELF3Q5SZQ8 465 aaKnown RBP9.27□□□□□ -0.93
KPNB1-213ENST00000583013 SH3RF1Q7Z6J0 888 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 PPTC7Q8NI37 304 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 CCDC12Q8WUD4 166 aaPredicted RBP9.27□□□□□ -0.93
KPNB1-213ENST00000583013 AFG1LQ8WV93 481 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 PHKBQ93100 1093 aa9.27□□□□□ -0.93
KPNB1-213ENST00000583013 VTI1AQ96AJ9 217 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms