RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 MMP3P08254 477 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 CASTP20810 708 aaKnown RBP12.62□□□□□ -0.39
TOP3A-210ENST00000580713 RBL2Q08999 1139 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 HERC4Q5GLZ8 1057 aaPredicted RBP12.62□□□□□ -0.39
TOP3A-210ENST00000580713 ZNF618Q5T7W0 954 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 IER5LQ5T953 404 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 SYDE2Q5VT97 1194 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 TTBK2Q6IQ55 1244 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 SESTD1Q86VW0 696 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 SUGP1Q8IWZ8 645 aaKnown RBP12.62□□□□□ -0.39
TOP3A-210ENST00000580713 IFNL3Q8IZI9 196 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 PBXIP1Q96AQ6 731 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 PRRX2Q99811 253 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 RANBP17Q9H2T7 1088 aaKnown RBP12.62□□□□□ -0.39
TOP3A-210ENST00000580713 HDAC6Q9UBN7 1215 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 GTF2IRD1Q9UHL9 959 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 MYH7P12883 1935 aa12.62□□□□□ -0.39
TOP3A-210ENST00000580713 LCTP09848 1927 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 PATL2C9JE40 543 aaKnown RBP12.61□□□□□ -0.39
TOP3A-210ENST00000580713 RNF113AO15541 343 aaKnown RBP12.61□□□□□ -0.39
TOP3A-210ENST00000580713 NCK2O43639 380 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 GFRA3O60609 400 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 UPP2O95045 317 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 GH1P01241 217 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 PSEN2P49810 448 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 RPS6P62753 249 aaKnown RBP12.61□□□□□ -0.39
TOP3A-210ENST00000580713 HTRA4P83105 476 aaPredicted RBP12.61□□□□□ -0.39
TOP3A-210ENST00000580713 PTK7Q13308 1070 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 LY6KQ17RY6 165 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 SEPT14Q6ZU15 432 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 TMEM192Q8IY95 271 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 DNERQ8NFT8 737 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 DCAF4Q8WV16 495 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 KAT2BQ92831 832 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 EDAQ92838 391 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 NAPBQ9H115 298 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 GPCPD1Q9NPB8 672 aa12.61□□□□□ -0.39
TOP3A-210ENST00000580713 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 TMEM221A6NGB7 291 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 M0R296 226 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 M0R2C6 588 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 STXBP3O00186 592 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 NMT2O60551 498 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 EDNRBP24530 442 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 NUCB1Q02818 461 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 PPARAQ07869 468 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 SMAD2Q15796 467 aaKnown RBP12.6□□□□□ -0.39
TOP3A-210ENST00000580713 DGKDQ16760 1214 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 FBXO11Q86XK2 927 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 DHX37Q8IY37 1157 aaKnown RBP12.6□□□□□ -0.39
TOP3A-210ENST00000580713 CLEC4DQ8WXI8 215 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 FAM86C1Q9NVL1 165 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 ZDBF2Q9HCK1 2354 aa12.6□□□□□ -0.39
TOP3A-210ENST00000580713 FRMPD2Q68DX3 1309 aaPredicted RBP12.6□□□□□ -0.39
TOP3A-210ENST00000580713 TECTAO75443 2155 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 MBTPS2O43462 519 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 CSPG5O95196 566 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 ZFYP08048 801 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-210ENST00000580713 ZNF200P98182 395 aaPredicted RBP12.59□□□□□ -0.39
TOP3A-210ENST00000580713 FOXK2Q01167 660 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 ARHGAP1Q07960 439 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 MFSD10Q14728 455 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 PKN1Q16512 942 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 TRIM67Q6ZTA4 783 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 BMP8AQ7Z5Y6 402 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 CHD1LQ86WJ1 897 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 WNT8BQ93098 351 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 KATNAL1Q9BW62 490 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 IGFLR1Q9H665 355 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 EMSYQ7Z589 1322 aa12.59□□□□□ -0.39
TOP3A-210ENST00000580713 RSPH10B2B2RC85 870 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 SMARCA5O60264 1052 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-210ENST00000580713 RANBP6O60518 1105 aaKnown RBP12.58□□□□□ -0.4
TOP3A-210ENST00000580713 RSPH10BP0C881 870 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 CTNNB1P35222 781 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 LTBRP36941 435 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 THPOP40225 353 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 DLX2Q07687 328 aaPredicted RBP12.58□□□□□ -0.4
TOP3A-210ENST00000580713 TCF15Q12870 199 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 COL19A1Q14993 1142 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 KIAA0753Q2KHM9 967 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 TRIM71Q2Q1W2 868 aaKnown RBP12.58□□□□□ -0.4
TOP3A-210ENST00000580713 TRAF7Q6Q0C0 670 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 BTNL9Q6UXG8 535 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 LRRCC1Q9C099 1032 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 LNPKQ9C0E8 428 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 INCENPQ9NQS7 918 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 IL17RBQ9NRM6 502 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 ECHDC1Q9NTX5 307 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 PNMA2Q9UL42 364 aa12.58□□□□□ -0.4
TOP3A-210ENST00000580713 PTPRZ1P23471 2315 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-210ENST00000580713 ZFHX2Q9C0A1 2572 aaPredicted RBP12.57□□□□□ -0.4
TOP3A-210ENST00000580713 ZNF286BP0CG31 522 aa12.57□□□□□ -0.4
TOP3A-210ENST00000580713 CTDSPL2Q05D32 466 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms