RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 TNNT3P45378 269 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-209ENST00000580095 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.553e-9■■■■■ 34.7
TOP3A-209ENST00000580095 KRT83P78385 493 aa11.64□□□□□ -0.55
TOP3A-209ENST00000580095 GFPT1Q06210 699 aaPredicted RBP11.64□□□□□ -0.55
TOP3A-209ENST00000580095 EZH2Q15910 746 aaKnown RBP11.64□□□□□ -0.55
TOP3A-209ENST00000580095 EP400NLQ6ZTU2 488 aa11.64□□□□□ -0.55
TOP3A-209ENST00000580095 DNAAF5Q86Y56 855 aa11.64□□□□□ -0.55
TOP3A-209ENST00000580095 FAM114A1Q8IWE2 563 aa11.64□□□□□ -0.55
TOP3A-209ENST00000580095 NOC3LQ8WTT2 800 aaKnown RBP11.64□□□□□ -0.55
TOP3A-209ENST00000580095 P2RX7Q99572 595 aaKnown RBP11.64□□□□□ -0.55
TOP3A-209ENST00000580095 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
TOP3A-209ENST00000580095 SALL4Q9UJQ4 1053 aa11.64□□□□□ -0.55
TOP3A-209ENST00000580095 SIK3Q9Y2K2 1263 aa11.64□□□□□ -0.55
TOP3A-209ENST00000580095 ESYT2A0FGR8 921 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 AKR1B10O60218 316 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 LMAN1P49257 510 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 KIF5AQ12840 1032 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 COASYQ13057 564 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 IKQ13123 557 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 SPA17Q15506 151 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 QRICH1Q2TAL8 776 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 LRRC55Q6ZSA7 311 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 PROM2Q8N271 834 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 COG1Q8WTW3 980 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 CUL5Q93034 780 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 RIC8AQ9NPQ8 531 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 MYO1AQ9UBC5 1043 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 RAB21Q9UL25 225 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 PCDHA1Q9Y5I3 950 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 ZNF831Q5JPB2 1677 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 IGKV6D-41A0A0C4DH26 115 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 POTEFA5A3E0 1075 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 MAP2K7O14733 419 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 BUB1O43683 1085 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 POTEIP0CG38 1075 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 SNHG28P0DPA3 235 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 MYBL2P10244 700 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 EEF2P13639 858 aaKnown RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 HOXA10P31260 410 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 NOVP48745 357 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 KIF11P52732 1056 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 CASP8Q14790 479 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 POTEGQ6S5H5 508 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 POTEEQ6S8J3 1075 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 SPICE1Q8N0Z3 855 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 HDAC7Q8WUI4 952 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 RIN2Q8WYP3 895 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 ERGIC2Q96RQ1 377 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 PANK4Q9NVE7 773 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 FAN1Q9Y2M0 1017 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 ZBTB5O15062 677 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 SLC1A4P43007 532 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 PSMC6P62333 389 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 PTPROQ16827 1216 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 TDRD12Q587J7 1177 aaKnown RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.63□□□□□ -0.55
TOP3A-209ENST00000580095 HDXQ7Z353 690 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 DNAJC19Q96DA6 116 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 ADAM21Q9UKJ8 722 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 ATP6V0A2Q9Y487 856 aa11.63□□□□□ -0.55
TOP3A-209ENST00000580095 EIF3CLB5ME19 914 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 ADRA2BP18089 450 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 HOXA13P31271 388 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 HNRNPH2P55795 449 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 RASSF7Q02833 373 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 SEPT2Q15019 361 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 CCDC40Q4G0X9 1142 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 PRR16Q569H4 304 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 HERC4Q5GLZ8 1057 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 NFRKBQ6P4R8 1299 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 CACNA2D4Q7Z3S7 1137 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 EIF3CQ99613 913 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 NUP58Q9BVL2 599 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 RAB34Q9BZG1 259 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 COA1Q9GZY4 146 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 STK17AQ9UEE5 414 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 TRPC5Q9UL62 973 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 PCDHA13Q9Y5I0 950 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 LOC102724159A0A0B4J2E5 919 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 ERLIN1O75477 346 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 MRPL12P52815 198 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 SLC7A5Q01650 507 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 CYP4A11Q02928 519 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 PWP2Q15269 919 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 FAM26FQ5R3K3 315 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 GPBP1Q86WP2 473 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 SP8Q8IXZ3 490 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 MYOCDQ8IZQ8 938 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 GUF1Q8N442 669 aaKnown RBP11.62□□□□□ -0.55
TOP3A-209ENST00000580095 CYP2W1Q8TAV3 490 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 TEKT1Q969V4 418 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 IKZF4Q9H2S9 585 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 PLAGL2Q9UPG8 496 aa11.62□□□□□ -0.55
TOP3A-209ENST00000580095 ATP8B1O43520 1251 aa11.61□□□□□ -0.55
TOP3A-209ENST00000580095 MED24O75448 989 aa11.61□□□□□ -0.55
TOP3A-209ENST00000580095 KRT18P05783 430 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms