RNA–Protein interactions for RNA: ENST00000580054.1

SMARCD2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-208ENST00000580054 UPP2O95045 317 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 GH1P01241 217 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 VCPP55072 806 aaKnown RBP10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 CTDSPL2Q05D32 466 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 HYAL1Q12794 435 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 SMAD4Q13485 552 aaKnown RBP10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 MFSD10Q14728 455 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 KIAA0753Q2KHM9 967 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 CTC1Q2NKJ3 1217 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 BTNL9Q6UXG8 535 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 TRIM67Q6ZTA4 783 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 SEPT14Q6ZU15 432 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 BMP8AQ7Z5Y6 402 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 DCAF4Q8WV16 495 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 SEC62Q99442 399 aaKnown RBP10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 GPCPD1Q9NPB8 672 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 ECHDC1Q9NTX5 307 aa10.94□□□□□ -0.66
SMARCD2-208ENST00000580054 PATL2C9JE40 543 aaKnown RBP10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 GRM6O15303 877 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 FOXP2O15409 715 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 F2P00734 622 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 LINC00271P0C7V0 271 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 GNAT2P19087 354 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 CASTP20810 708 aaKnown RBP10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 CTNNB1P35222 781 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 PLEKHG4Q58EX7 1191 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 SUGP1Q8IWZ8 645 aaKnown RBP10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 DNERQ8NFT8 737 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 GPATCH3Q96I76 525 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 MPHOSPH6Q99547 160 aaKnown RBP10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 NAPBQ9H115 298 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 DOCK5Q9H7D0 1870 aa10.93□□□□□ -0.66
SMARCD2-208ENST00000580054 EMSYQ7Z589 1322 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 HAS3O00219 553 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 SORBS3O60504 671 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 THPOP40225 353 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 NOVP48745 357 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 DGKDQ16760 1214 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 USH1GQ495M9 461 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 IGFLR1Q9H665 355 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 COL20A1Q9P218 1284 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 CD207Q9UJ71 328 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 VPS13AQ96RL7 3174 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 GVINP1Q7Z2Y8 2422 aa10.92□□□□□ -0.66
SMARCD2-208ENST00000580054 RSPH10B2B2RC85 870 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 RANBP6O60518 1105 aaKnown RBP10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 ZFYP08048 801 aaPredicted RBP10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 SLC3A2P08195 630 aaKnown RBP10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 CTSHP09668 335 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 RSPH10BP0C881 870 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 ZXDAP98168 799 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 C20orf194Q5TEA3 1177 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 DHX37Q8IY37 1157 aaKnown RBP10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 FBXL6Q8N531 539 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 TBC1D5Q92609 795 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 TOP1MTQ969P6 601 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 TAAR1Q96RJ0 339 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 KATNAL1Q9BW62 490 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 IFIH1Q9BYX4 1025 aaKnown RBP10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 NACAP1Q9BZK3 213 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 DMDP11532 3685 aa10.91□□□□□ -0.66
SMARCD2-208ENST00000580054 WDR19Q8NEZ3 1342 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 PLXNA4Q9HCM2 1894 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 NCK2O43639 380 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 PDHBP11177 359 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 FOXK2Q01167 660 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 ASCL5Q7RTU5 278 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 SERINC5Q86VE9 423 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 SYTL5Q8TDW5 730 aaPredicted RBP10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 SEPT8Q92599 483 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 ATOH1Q92858 354 aaPredicted RBP10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 MSLNLQ96KJ4 702 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 PRRX2Q99811 253 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 TMEM47Q9BQJ4 181 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 CPVLQ9H3G5 476 aa10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
SMARCD2-208ENST00000580054 TTC3P53804 2025 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 KAT6AQ92794 2004 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 CACNA1BQ00975 2339 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 LOC730098B7Z3J9 87 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 C5orf67F2Z3F1 127 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 H0Y858 1186 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 NDUFV1P49821 464 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 ERICH6BQ5W0A0 696 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 ADGRD2Q7Z7M1 963 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 FIBCD1Q8N539 461 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 PPTC7Q8NI37 304 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 EMID1Q96A84 441 aaPredicted RBP10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 ASIC4Q96FT7 647 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 C11orf84Q9BUA3 381 aaPredicted RBP10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 TLR9Q9NR96 1032 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 CLEC1BQ9P126 229 aa10.89□□□□□ -0.67
SMARCD2-208ENST00000580054 ADGRA3Q8IWK6 1321 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 B4DLN1 442 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 TREHO43280 583 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 RGS20O76081 388 aa10.88□□□□□ -0.67
SMARCD2-208ENST00000580054 PDGFBP01127 241 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms