RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 PPM1EQ8WY54 764 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 CCDC127Q96BQ5 260 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 TBC1D31Q96DN5 1066 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 DONSONQ9NYP3 566 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 FAM184BQ9ULE4 1060 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 MMP1P03956 469 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 XPAP23025 273 aaPredicted RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 DSTYKQ6XUX3 929 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 SRGAP1Q7Z6B7 1085 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 ZNF589Q86UQ0 364 aaPredicted RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 PSPC1Q8WXF1 523 aaKnown RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 GCOM2Q9BZD3 368 aaPredicted RBP11.19□□□□□ -0.62
MSI2-209ENST00000579483 BLZF1Q9H2G9 400 aa11.19□□□□□ -0.62
MSI2-209ENST00000579483 PFASO15067 1338 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 USP32Q8NFA0 1604 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 PFKFB1P16118 471 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 ZBTB33Q86T24 672 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 MAP7D3Q8IWC1 876 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 CEP95Q96GE4 821 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 GSDMAQ96QA5 445 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 GBA2Q9HCG7 927 aaPredicted RBP11.18□□□□□ -0.62
MSI2-209ENST00000579483 A0A1W2PQ27 194 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 A0A1W2PQ64 194 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 A0A1W2PQD8 194 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 RPN1P04843 607 aaKnown RBP11.18□□□□□ -0.62
MSI2-209ENST00000579483 MAGEA1P43355 309 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 MAPK6Q16659 721 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 CCDC63Q8NA47 563 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 VAV2P52735 878 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 SCRN1Q12765 414 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 CTR9Q6PD62 1173 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 MICALCLQ6ZW33 695 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 CHST13Q8NET6 341 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 NSUN4Q96CB9 384 aaKnown RBP11.18□□□□□ -0.62
MSI2-209ENST00000579483 GIPC1O14908 333 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 CIITAP33076 1130 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 MTMR2Q13614 643 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 GRM4Q14833 912 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 C1orf228Q6PIY5 440 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 ZNF302Q9NR11 478 aa11.18□□□□□ -0.62
MSI2-209ENST00000579483 KRT81Q14533 505 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 SLC39A14Q15043 492 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 SBK1Q52WX2 424 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 CCT6BQ92526 530 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 TMX1Q9H3N1 280 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 RARBP10826 455 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 ACTN1P12814 892 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 HOXA13P31271 388 aaPredicted RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 PRELPP51888 382 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 FANCCQ00597 558 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 KRBA2Q6ZNG9 492 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 ERO1BQ86YB8 467 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 PPM1KQ8N3J5 372 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 TTC39CQ8N584 583 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 DHTKD1Q96HY7 919 aaPredicted RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 NLRP4Q96MN2 994 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 TAB2Q9NYJ8 693 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 GOLGA8FQ08AF8 430 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 GOLGA8DPQ0D2H9 430 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 C12orf60Q5U649 245 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 TWF2Q6IBS0 349 aaKnown RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 ZNF449Q6P9G9 518 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 SYMPKQ92797 1274 aaKnown RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 SPATA33Q96N06 139 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 DISC1Q9NRI5 854 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 IMPACTQ9P2X3 320 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 DNAI1Q9UI46 699 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 TNS2Q63HR2 1409 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 RPLP2P05387 115 aaKnown RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 TDRD7Q8NHU6 1098 aaKnown RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 PPP1R9BQ96SB3 815 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 NSRP1Q9H0G5 558 aaKnown RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 USTQ9Y2C2 406 aa11.17□□□□□ -0.62
MSI2-209ENST00000579483 ZBTB12Q9Y330 459 aaPredicted RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 BZW2Q9Y6E2 419 aaKnown RBP11.17□□□□□ -0.62
MSI2-209ENST00000579483 LGSNQ5TDP6 509 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 CROCCP2Q86T23 111 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 GJA10Q969M2 543 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.16□□□□□ -0.62
MSI2-209ENST00000579483 LSM14BQ9BX40 385 aaKnown RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 LRRC4Q9HBW1 653 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 POLR3EQ9NVU0 708 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 STK36Q9NRP7 1315 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 RGS2P41220 211 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 NSFP46459 744 aaKnown RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 C6orf163Q5TEZ5 329 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 FBXO33Q7Z6M2 555 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 RNF180Q86T96 592 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 OR6J1Q8NGC5 347 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 PI4K2BQ8TCG2 481 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 USP28Q96RU2 1077 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 PRDM5Q9NQX1 630 aaPredicted RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 RIOK3O14730 519 aaKnown RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 OPA1O60313 960 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 CYP2D6P10635 497 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 ATP5DP30049 168 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 TFAMQ00059 246 aaKnown RBP11.16□□□□□ -0.62
MSI2-209ENST00000579483 MYL7Q01449 175 aa11.16□□□□□ -0.62
MSI2-209ENST00000579483 PPP2R5EQ16537 467 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms