RNA–Protein interactions for RNA: ENST00000579466.1

MSI2-208, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 186 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-208	ENST00000579466	IKBKE	Q14164	716 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	HIC1	Q14526	733 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	EP400NL	Q6ZTU2	488 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	HOMER1	Q86YM7	354 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	STAG2	Q8N3U4	1231 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	IL31RA	Q8NI17	732 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	SPATA33	Q96N06	139 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	IWS1	Q96ST2	819 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	RAD9A	Q99638	391 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	UBE2Z	Q9H832	354 aa	Predicted RBP	11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	CD320	Q9NPF0	282 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	DIAPH3	Q9NSV4	1193 aa		11.21	□□□□□ -0.61
MSI2-208	ENST00000579466	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	LGR5	O75473	907 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	EIF3J	O75822	258 aa	Known RBP	11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	UPP2	O95045	317 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	CSPG5	O95196	566 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	IL9	P15248	144 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	ERVK-21	P61565	698 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	RBL2	Q08999	1139 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	LAMC2	Q13753	1193 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	TRIM71	Q2Q1W2	868 aa	Known RBP	11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	HSDL1	Q3SXM5	330 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	TRAF7	Q6Q0C0	670 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	FBXO22	Q8NEZ5	403 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	DBF4B	Q8NFT6	615 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	PPTC7	Q8NI37	304 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	PDCD2L	Q9BRP1	358 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	UBAC1	Q9BSL1	405 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	C11orf16	Q9NQ32	467 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	MUC6	Q6W4X9	2439 aa		11.2	□□□□□ -0.62
MSI2-208	ENST00000579466	ATG2A	Q2TAZ0	1938 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	MYO7A	Q13402	2215 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	HAS3	O00219	553 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	OPLAH	O14841	1288 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	PPP1R11	O60927	126 aa	Predicted RBP	11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	RGS20	O76081	388 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	PARN	O95453	639 aa	Known RBP	11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	AMH	P03971	560 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	UBA1	P22314	1058 aa	Known RBP	11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	IMMT	Q16891	758 aa	Known RBP	11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	CCDC178	Q5BJE1	867 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	IFIT1B	Q5T764	474 aa	Known RBP	11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	FCHSD1	Q86WN1	690 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	PIBF1	Q8WXW3	757 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	EMID1	Q96A84	441 aa	Predicted RBP	11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	AMN	Q9BXJ7	453 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	ZSWIM5	Q9P217	1185 aa		11.19	□□□□□ -0.62
MSI2-208	ENST00000579466	C17orf102	A2RUQ5	167 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	RSPH10B2	B2RC85	870 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	KLRF2	D3W0D1	207 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466		H3BQ06	376 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	EFCAB14	O75071	495 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	RSPH10B	P0C881	870 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	HSD17B4	P51659	736 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	SP2	Q02086	613 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	SP4	Q02446	784 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	HDAC1	Q13547	482 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	PGM5	Q15124	567 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	CELF3	Q5SZQ8	465 aa	Known RBP	11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	MYSM1	Q5VVJ2	828 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	ATP6V0A1	Q93050	837 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	UIMC1	Q96RL1	719 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	OSBPL7	Q9BZF2	842 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	BCAS3	Q9H6U6	928 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	MLXIP	Q9HAP2	919 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	LMCD1	Q9NZU5	365 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	INSL6	Q9Y581	213 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	PCDHA1	Q9Y5I3	950 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	KAT6A	Q92794	2004 aa		11.18	□□□□□ -0.62
MSI2-208	ENST00000579466	RALGAPA2	Q2PPJ7	1873 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	EMSY	Q7Z589	1322 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	NOP56	O00567	594 aa	Known RBP	11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	TREH	O43280	583 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	LGALS2	P05162	132 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	SMIM10L2A	P0DMW4	78 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	SMIM10L2B	P0DMW5	78 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	CCND2	P30279	289 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	SERINC5	Q86VE9	423 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	TRIM50	Q86XT4	487 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	GJD3	Q8N144	294 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	ANKS1A	Q92625	1134 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	PIGS	Q96S52	555 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	YME1L1	Q96TA2	773 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	KRT23	Q9C075	422 aa		11.17	□□□□□ -0.62
MSI2-208	ENST00000579466	ZBTB5	O15062	677 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	PPFIA4	O75335	1185 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	HOXD11	P31277	338 aa	Predicted RBP	11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	LEXM	Q3ZCV2	418 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	EPC2	Q52LR7	807 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	UTP14C	Q5TAP6	766 aa	Known RBP	11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	CYB5R4	Q7L1T6	521 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	CHD1L	Q86WJ1	897 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	PLEKHM2	Q8IWE5	1019 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	FAM178B	Q8IXR5	827 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	SEPT8	Q92599	483 aa		11.16	□□□□□ -0.62
MSI2-208	ENST00000579466	C16orf70	Q9BSU1	422 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms