RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 SYDE2Q5VT97 1194 aa16.35■□□□□ 0.21
CSNK1D-211ENST00000579316 IFNL3Q8IZI9 196 aa16.35■□□□□ 0.21
CSNK1D-211ENST00000579316 MSLNLQ96KJ4 702 aa16.35■□□□□ 0.21
CSNK1D-211ENST00000579316 C11orf84Q9BUA3 381 aaPredicted RBP16.35■□□□□ 0.21
CSNK1D-211ENST00000579316 IL17RBQ9NRM6 502 aa16.35■□□□□ 0.21
CSNK1D-211ENST00000579316 CACNA1BQ00975 2339 aa16.35■□□□□ 0.21
CSNK1D-211ENST00000579316 RSPH10B2B2RC85 870 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 PATL2C9JE40 543 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 SLC3A2P08195 630 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 RSPH10BP0C881 870 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 HOXD8P13378 290 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 VCPP55072 806 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 MFSD10Q14728 455 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 KIAA0753Q2KHM9 967 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 TTBK2Q6IQ55 1244 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 SERINC5Q86VE9 423 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 KBTBD3Q8NAB2 608 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 RGS22Q8NE09 1264 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 ATOH1Q92858 354 aaPredicted RBP16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 ASIC4Q96FT7 647 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.211e-6■■■■□ 21.8
CSNK1D-211ENST00000579316 WDR19Q8NEZ3 1342 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 VPS13AQ96RL7 3174 aa16.34■□□□□ 0.21
CSNK1D-211ENST00000579316 EPG5Q9HCE0 2579 aa16.33■□□□□ 0.21
CSNK1D-211ENST00000579316 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 GRM6O15303 877 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 RNF113AO15541 343 aaKnown RBP16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 HMMRO75330 724 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 APPP05067 770 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 CTNNB1P35222 781 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 SLC16A2P36021 539 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 ADAM15Q13444 863 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 HIC1Q14526 733 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 LY6KQ17RY6 165 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 CCDC96Q2M329 555 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 SIRT2Q8IXJ6 389 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 SEPT8Q92599 483 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 ALG1Q9BT22 464 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 NACAP1Q9BZK3 213 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 MAF1Q9H063 256 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 RWDD3Q9Y3V2 267 aa16.33■□□□□ 0.2
CSNK1D-211ENST00000579316 M0R2C6 588 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 NMT2O60551 498 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 ZFYP08048 801 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 AVPR2P30518 371 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 BMPR1AP36894 532 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 ZNF200P98182 395 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 PPARAQ07869 468 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 KIAA1217Q5T5P2 1943 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 SMRP1Q8NCR6 262 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 PPTC7Q8NI37 304 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 IFIH1Q9BYX4 1025 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-211ENST00000579316 ZNF292O60281 2723 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 LINC01565O15544 149 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 MMP1P03956 469 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 ZNF286BP0CG31 522 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 GTF2F1P35269 517 aaKnown RBP eCLIP16.31■□□□□ 0.21e-7■■■■■ 38.7
CSNK1D-211ENST00000579316 THPOP40225 353 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 COASYQ13057 564 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 CHST3Q7LGC8 479 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 ASCL5Q7RTU5 278 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 FIBCD1Q8N539 461 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 CLP1Q92989 425 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 IL17RAQ96F46 866 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 BCL11AQ9H165 835 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 RC3H2Q9HBD1 1191 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 DDX41Q9UJV9 622 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 WDR87Q6ZQQ6 2873 aa16.31■□□□□ 0.2
CSNK1D-211ENST00000579316 PRR23AA6NEV1 266 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 TSPY2A6NKD2 308 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 CAND2O75155 1236 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 UPP2O95045 317 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 HOXC8P31273 242 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 LAMC2Q13753 1193 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 SEPT14Q6ZU15 432 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 CLEC1BQ9P126 229 aa16.3■□□□□ 0.2
CSNK1D-211ENST00000579316 NBL1P41271 181 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 NDUFV1P49821 464 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 CAMK1Q14012 370 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 DHX37Q8IY37 1157 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 EFHBQ8N7U6 833 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 APBB2Q92870 758 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 NAPBQ9H115 298 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 ECHDC1Q9NTX5 307 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 MTMR7Q9Y216 660 aa16.29■□□□□ 0.2
CSNK1D-211ENST00000579316 ADGRA3Q8IWK6 1321 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 H0Y858 1186 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 GALR2O43603 387 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 PPFIA4O75335 1185 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 ICAM3P32942 547 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 RRP1P56182 461 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 STXBP2Q15833 593 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 NSUN6Q8TEA1 469 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 PHF7Q9BWX1 381 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 PLVAPQ9BX97 442 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 IGFLR1Q9H665 355 aa16.28■□□□□ 0.2
CSNK1D-211ENST00000579316 TLR9Q9NR96 1032 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms