RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 UTP14CQ5TAP6 766 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 BTNL9Q6UXG8 535 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KIAA1328Q86T90 577 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GPBP1Q86WP2 473 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 EHBP1Q8NDI1 1231 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CRYGNQ8WXF5 182 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NDST4Q9H3R1 872 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TDRD3Q9H7E2 651 aaKnown RBP10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 AGPAT5Q9NUQ2 364 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZNF219Q9P2Y4 722 aaPredicted RBP10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SIK3Q9Y2K2 1263 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FHOD1Q9Y613 1164 aa10.38□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PSME4Q14997 1843 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 POTEB3A0JP26 581 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 POTECB2RU33 542 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 E9PMD0 336 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MEIS2O14770 477 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KIF20AO95235 890 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 IPO7O95373 1038 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ABL1P00519 1130 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SSBP05455 408 aaKnown RBP eCLIP10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 BMP3P12645 472 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CHRNA5P30532 468 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SREBF1P36956 1147 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 AMPD2Q01433 879 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 BRD3Q15059 726 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 LRRC41Q15345 812 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZCWPW2Q504Y3 356 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 HAUS3Q68CZ6 603 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CC2D1AQ6P1N0 951 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 POTEBQ6S5H4 581 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TEX2Q8IWB9 1127 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MSANTD4Q8NCY6 345 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ERMNQ8TAM6 284 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 C7orf43Q8WVR3 580 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GJA10Q969M2 543 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PARD6BQ9BYG5 372 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 EDEM3Q9BZQ6 932 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TSGA10Q9BZW7 698 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NHEJ1Q9H9Q4 299 aaPredicted RBP10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TMOD2Q9NZR1 351 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PUF60Q9UHX1 559 aaKnown RBP10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MYO6Q9UM54 1294 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GUCA1BQ9UMX6 200 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KIAA1024Q9UPX6 916 aa10.37□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PITPNM2Q9BZ72 1349 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FRMD3A2A2Y4 597 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CTAGE15A4D2H0 777 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KRT86O43790 486 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MED24O75448 989 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SEC31AO94979 1220 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GNA14O95837 355 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GH2P01242 217 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CTAGE8P0CG41 777 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZSCAN20P17040 1043 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CYP11B2P19099 503 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CIITAP33076 1130 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 VAV2P52735 878 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FKBP3Q00688 224 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TRAF1Q13077 416 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 IKQ13123 557 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CCDC40Q4G0X9 1142 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ARHGAP27Q6ZUM4 889 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TRAPPC11Q7Z392 1133 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CTAGE6Q86UF2 777 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CCDC84Q86UT8 332 aaPredicted RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CTAGE4Q8IX94 777 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ZC3H3Q8IXZ2 948 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 ETNPPLQ8TBG4 499 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 EPC1Q9H2F5 836 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 TRIM10Q9UDY6 481 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 HERC5Q9UII4 1024 aaKnown RBP10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PCDHA2Q9Y5H9 948 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 COL4A3BPQ9Y5P4 624 aa10.36□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CCDC151A5D8V7 595 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SPDYE3A6NKU9 549 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NKRFO15226 690 aaKnown RBP eCLIP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PPIP5K2O43314 1243 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 KRT18P05783 430 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 CYP3A4P08684 503 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 STAT3P40763 770 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PLA2G4AP47712 749 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SLC12A3P55017 1021 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 MARSP56192 900 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SNAP25P60880 206 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 JAG1P78504 1218 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SPIRE1Q08AE8 756 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 RRP1BQ14684 758 aaKnown RBP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 SPA17Q15506 151 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GRIPAP1Q4V328 841 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NCAPH2Q6IBW4 605 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PDXDC1Q6P996 788 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PPP4R3CPQ6ZMV5 832 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 GLIS3Q8NEA6 775 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 NEK11Q8NG66 645 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 EEF2KMTQ96G04 330 aa10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 PRMT6Q96LA8 375 aaPredicted RBP10.35□□□□□ -0.75
CDK5RAP3-208ENST00000578525 FAM20AQ96MK3 541 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms