RNA–Protein interactions for RNA: ENST00000578297.1

LIMD2-204, Transcript of LIM domain containing 2, humanhuman

TSL 2

Gene LIMD2, Length 760 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-204ENST00000578297 SLC43A3Q8NBI5 491 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 SEZ6LQ9BYH1 1024 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 UPF2Q9HAU5 1272 aaKnown RBP26.45■■□□□ 1.82
LIMD2-204ENST00000578297 VPS54Q9P1Q0 977 aa26.45■■□□□ 1.82
LIMD2-204ENST00000578297 MROH7Q68CQ1 1323 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 MMP3P08254 477 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 MYL3P08590 195 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 UBA1P22314 1058 aaKnown RBP26.44■■□□□ 1.82
LIMD2-204ENST00000578297 SEMA3FQ13275 785 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 PPTC7Q8NI37 304 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 BICD2Q8TD16 824 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 MTG1Q9BT17 334 aaPredicted RBP26.44■■□□□ 1.82
LIMD2-204ENST00000578297 ANO3Q9BYT9 981 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 TMEM260Q9NX78 707 aa26.44■■□□□ 1.82
LIMD2-204ENST00000578297 PQBP1O60828 265 aaKnown RBP26.43■■□□□ 1.82
LIMD2-204ENST00000578297 LARGE1O95461 756 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 GGPS1O95749 300 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 ITGA7Q13683 1181 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 FAM177A1Q8N128 213 aaPredicted RBP26.43■■□□□ 1.82
LIMD2-204ENST00000578297 GTF3C6Q969F1 213 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 GPRASP2Q96D09 838 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 CDHR1Q96JP9 859 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 PGBD1Q96JS3 809 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 UBIAD1Q9Y5Z9 338 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 MYH7BA7E2Y1 1941 aa26.43■■□□□ 1.82
LIMD2-204ENST00000578297 GRIN2DO15399 1336 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 STK36Q9NRP7 1315 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 DCDC2CA8MYV0 355 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 CTDNEP1O95476 244 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 ITGB5P18084 799 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 SREBF1P36956 1147 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 NEDD9Q14511 834 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 JAKMIP3Q5VZ66 844 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 REXO1Q8N1G1 1221 aaKnown RBP26.42■■□□□ 1.82
LIMD2-204ENST00000578297 NECAB1Q8N987 351 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 SENP7Q9BQF6 1050 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 PDLIM7Q9NR12 457 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 PRKAG2Q9UGJ0 569 aa26.42■■□□□ 1.82
LIMD2-204ENST00000578297 ADAMTS3O15072 1205 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 CLTBP09497 229 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 NLRP5P59047 1200 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 PSMC6P62333 389 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 DGKDQ16760 1214 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 MLXIPQ9HAP2 919 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 JADE2Q9NQC1 790 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 LIMCH1Q9UPQ0 1083 aa26.41■■□□□ 1.82
LIMD2-204ENST00000578297 MAFGO15525 162 aa26.4■■□□□ 1.82
LIMD2-204ENST00000578297 FAAP100Q0VG06 881 aa26.4■■□□□ 1.82
LIMD2-204ENST00000578297 SPATA33Q96N06 139 aa26.4■■□□□ 1.82
LIMD2-204ENST00000578297 SCN10AQ9Y5Y9 1956 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 HOXD8P13378 290 aaPredicted RBP26.39■■□□□ 1.82
LIMD2-204ENST00000578297 MTMR1Q13613 665 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 HSDL1Q3SXM5 330 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 METTL7BQ6UX53 244 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 CHRDL2Q6WN34 429 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 FAM126BQ8IXS8 530 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 GIMAP8Q8ND71 665 aaPredicted RBP26.39■■□□□ 1.82
LIMD2-204ENST00000578297 AIFM3Q96NN9 605 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 MXRA8Q9BRK3 442 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 BCAS3Q9H6U6 928 aa26.39■■□□□ 1.82
LIMD2-204ENST00000578297 PRDM5Q9NQX1 630 aaPredicted RBP26.39■■□□□ 1.82
LIMD2-204ENST00000578297 TRIM43BA6NCK2 446 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 SORBS3O60504 671 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 PPFIA4O75335 1185 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 ARHGAP4P98171 946 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 CYFIP1Q7L576 1253 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 SH3RF1Q7Z6J0 888 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 CRYGNQ8WXF5 182 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 TRIM43Q96BQ3 446 aaPredicted RBP26.38■■□□□ 1.81
LIMD2-204ENST00000578297 GDF15Q99988 308 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 PRO3102Q9H379 93 aa26.38■■□□□ 1.81
LIMD2-204ENST00000578297 COLQQ9Y215 455 aaPredicted RBP26.38■■□□□ 1.81
LIMD2-204ENST00000578297 TLR3O15455 904 aaKnown RBP26.37■■□□□ 1.81
LIMD2-204ENST00000578297 CD4P01730 458 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 CYP3A4P08684 503 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 MAGEA10P43363 369 aaPredicted RBP26.37■■□□□ 1.81
LIMD2-204ENST00000578297 RABEP1Q15276 862 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 NBPF20Q3BBV1 942 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 CEP55Q53EZ4 464 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 GALNT17Q6IS24 598 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 IL27Q8NEV9 243 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 TMEM39AQ9NV64 488 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 ORC3Q9UBD5 711 aaPredicted RBP26.37■■□□□ 1.81
LIMD2-204ENST00000578297 PCDHA4Q9UN74 947 aa26.37■■□□□ 1.81
LIMD2-204ENST00000578297 KIAA0355O15063 1070 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 ATP9AO75110 1047 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 KCNA2P16389 499 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 XBP1P17861 261 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 NFRKBQ6P4R8 1299 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 DAGLBQ8NCG7 672 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 NSUN7Q8NE18 718 aaKnown RBP26.36■■□□□ 1.81
LIMD2-204ENST00000578297 CYP2W1Q8TAV3 490 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 RASGRP4Q8TDF6 673 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 WASF1Q92558 559 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 KAT2BQ92831 832 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 TBC1D32Q96NH3 1257 aa26.36■■□□□ 1.81
LIMD2-204ENST00000578297 MEIS1O00470 390 aa26.35■■□□□ 1.81
LIMD2-204ENST00000578297 FDPSP14324 419 aaKnown RBP26.35■■□□□ 1.81
LIMD2-204ENST00000578297 BMP8BP34820 402 aa26.35■■□□□ 1.81
LIMD2-204ENST00000578297 NIPA1Q7RTP0 329 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms