RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 NFRKBQ6P4R8 1299 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 CCDC82Q8N4S0 544 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 HERVK_113Q902F9 699 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 TAAR1Q96RJ0 339 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 RMDN3Q96TC7 470 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 NOC4LQ9BVI4 516 aaKnown RBP14.71□□□□□ -0.05
CCDC57-211ENST00000578187 ZNF576Q9H609 170 aa14.71□□□□□ -0.05
CCDC57-211ENST00000578187 hCG_1642624A0A1W2PR95 340 aa14.7□□□□□ -0.06
CCDC57-211ENST00000578187 A6NJR5 290 aa14.7□□□□□ -0.06
CCDC57-211ENST00000578187 GH1P01241 217 aa14.7□□□□□ -0.06
CCDC57-211ENST00000578187 ADD1P35611 737 aaKnown RBP14.7□□□□□ -0.06
CCDC57-211ENST00000578187 PTPN11Q06124 597 aaPredicted RBP14.7□□□□□ -0.06
CCDC57-211ENST00000578187 SEPT14Q6ZU15 432 aa14.7□□□□□ -0.06
CCDC57-211ENST00000578187 C16orf59Q7L2K0 433 aa14.7□□□□□ -0.06
CCDC57-211ENST00000578187 ZNF274Q96GC6 653 aaPredicted RBP14.7□□□□□ -0.06
CCDC57-211ENST00000578187 GAS2L1Q99501 681 aaPredicted RBP14.7□□□□□ -0.06
CCDC57-211ENST00000578187 FRMPD4Q14CM0 1322 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 GCOM1H8Y6P7 765 aaPredicted RBP14.69□□□□□ -0.06
CCDC57-211ENST00000578187 hCG_1984214I3L0E3 225 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 PIK3CDO00329 1044 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 POLR2MP0CAP2 368 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 ACTN1P12814 892 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 HOXA13P31271 388 aaPredicted RBP14.69□□□□□ -0.06
CCDC57-211ENST00000578187 RFC2P35250 354 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 CHMP4BP1P59074 171 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 NTRK3Q16288 839 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 NBPF20Q3BBV1 942 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 RASIP1Q5U651 963 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 WWC2Q6AWC2 1192 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 PPP1R18Q6NYC8 613 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 OTOP2Q7RTS6 562 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 CCDC155Q8N6L0 562 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 ZNF713Q8N859 430 aaPredicted RBP14.69□□□□□ -0.06
CCDC57-211ENST00000578187 RETREG2Q8NC44 543 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 PBX4Q9BYU1 374 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 PXMP2Q9NR77 195 aa14.69□□□□□ -0.06
CCDC57-211ENST00000578187 TRMT13Q9NUP7 481 aaKnown RBP14.69□□□□□ -0.06
CCDC57-211ENST00000578187 ZBBXA8MT70 800 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 EIF3JO75822 258 aaKnown RBP14.68□□□□□ -0.06
CCDC57-211ENST00000578187 IFNAR1P17181 557 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 EIF2AK2P19525 551 aaKnown RBP14.68□□□□□ -0.06
CCDC57-211ENST00000578187 BFSP2Q13515 415 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 HEATR3Q7Z4Q2 680 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 GPKOWQ92917 476 aaPredicted RBP eCLIP14.68□□□□□ -0.06
CCDC57-211ENST00000578187 PDCD2LQ9BRP1 358 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 KATNAL1Q9BW62 490 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 SLC28A3Q9HAS3 691 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 MRVI1Q9Y6F6 885 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 SLC4A7Q9Y6M7 1214 aa14.68□□□□□ -0.06
CCDC57-211ENST00000578187 V9GY48 417 aaPredicted RBP14.68□□□□□ -0.06
CCDC57-211ENST00000578187 UMODL1Q5DID0 1318 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 STXBP3O00186 592 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 PITPNM1O00562 1244 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 MEIS2O14770 477 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 CYP2C9P11712 490 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 RBM25P49756 843 aaKnown RBP14.67□□□□□ -0.06
CCDC57-211ENST00000578187 AK2P54819 239 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 CCT2P78371 535 aaKnown RBP14.67□□□□□ -0.06
CCDC57-211ENST00000578187 GRIN2CQ14957 1233 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 ANKRD1Q15327 319 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 DGKDQ16760 1214 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 PFKFB3Q16875 520 aaPredicted RBP14.67□□□□□ -0.06
CCDC57-211ENST00000578187 TYW1BQ6NUM6 668 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 KCNV1Q6PIU1 500 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 TEX2Q8IWB9 1127 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 COPS5Q92905 334 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 SCLYQ96I15 445 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 LARP6Q9BRS8 491 aaKnown RBP14.67□□□□□ -0.06
CCDC57-211ENST00000578187 RNF26Q9BY78 433 aaPredicted RBP14.67□□□□□ -0.06
CCDC57-211ENST00000578187 WNT8AQ9H1J5 351 aa14.67□□□□□ -0.06
CCDC57-211ENST00000578187 NCOA5Q9HCD5 579 aaKnown RBP14.67□□□□□ -0.06
CCDC57-211ENST00000578187 MYH7BA7E2Y1 1941 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 GRXCR1A8MXD5 290 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 PRPF3O43395 683 aaKnown RBP14.66□□□□□ -0.06
CCDC57-211ENST00000578187 ARIH2O95376 493 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 NR3C2P08235 984 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 MMP3P08254 477 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 SCG2P13521 617 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 PBX2P40425 430 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 LAMC2Q13753 1193 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 PGM5Q15124 567 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 PKN1Q16512 942 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 LY6KQ17RY6 165 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 CCDC62Q6P9F0 684 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 SMARCC2Q8TAQ2 1214 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 AFG1LQ8WV93 481 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 CUL5Q93034 780 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 KIF2CQ99661 725 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 C22orf23Q9BZE7 217 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 PSTPIP2Q9H939 334 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 BARHL2Q9NY43 387 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 TPCN1Q9ULQ1 816 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 CDH23Q9H251 3354 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 UNC80Q8N2C7 3258 aa14.66□□□□□ -0.06
CCDC57-211ENST00000578187 MYCLP12524 364 aaPredicted RBP14.65□□□□□ -0.06
CCDC57-211ENST00000578187 ATP2A2P16615 1042 aaKnown RBP14.65□□□□□ -0.06
CCDC57-211ENST00000578187 NEK4P51957 841 aa14.65□□□□□ -0.06
CCDC57-211ENST00000578187 NAPAP54920 295 aa14.65□□□□□ -0.06
CCDC57-211ENST00000578187 PTGISQ16647 500 aa14.65□□□□□ -0.06
CCDC57-211ENST00000578187 USP17L6PQ6QN14 398 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms