RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 SHHQ15465 462 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 NBPF20Q3BBV1 942 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 C9orf50Q5SZB4 431 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 MYSM1Q5VVJ2 828 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 TYW1BQ6NUM6 668 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 SPATA33Q96N06 139 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 NOC4LQ9BVI4 516 aaKnown RBP12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 KATNAL1Q9BW62 490 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 TRPV6Q9H1D0 765 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 EHMT1Q9H9B1 1298 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 TRMT13Q9NUP7 481 aaKnown RBP12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 BARHL2Q9NY43 387 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 V9GY48 417 aaPredicted RBP12.55□□□□□ -0.4
PPP4R1-208ENST00000578178 SZT2Q5T011 3432 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SORBS3O60504 671 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SUPT20HL2P0C7V6 817 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 ZNF286BP0CG31 522 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SCG2P13521 617 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 ADCY7P51828 1080 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 EPHB4P54760 987 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 EVCP57679 992 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SP2Q02086 613 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SEMA3FQ13275 785 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 PFKFB3Q16875 520 aaPredicted RBP12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 GPR153Q6NV75 609 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 NLRX1Q86UT6 975 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SESTD1Q86VW0 696 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 TMEM199Q8N511 208 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 KAT2BQ92831 832 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 RNPC3Q96LT9 517 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 UPF3BQ9BZI7 483 aaKnown RBP12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 RIC8AQ9NPQ8 531 aa12.54□□□□□ -0.4
PPP4R1-208ENST00000578178 SPATA31C2B4DYI2 1134 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 CSF2RAP15509 400 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 PDIA3P30101 505 aaKnown RBP12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 CYP2C18P33260 490 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 CHMP4BP1P59074 171 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 TOB2Q14106 344 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 NEDD9Q14511 834 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 PSRC1Q6PGN9 363 aaPredicted RBP12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 PPP1R13LQ8WUF5 828 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 GPRASP2Q96D09 838 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 GLT8D2Q9H1C3 349 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 WNT8AQ9H1J5 351 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 RTEL1Q9NZ71 1219 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 PCDHA6Q9UN73 950 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 PCDHA8Q9Y5H6 950 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 UMODL1Q5DID0 1318 aa12.53□□□□□ -0.4
PPP4R1-208ENST00000578178 ESYT2A0FGR8 921 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 SMCO2A6NFE2 343 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 HAS3O00219 553 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 NOP56O00567 594 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 PRPF3O43395 683 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 EIF5BO60841 1220 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 PPFIA4O75335 1185 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 FOSP01100 380 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 CYP2C9P11712 490 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 PSEN2P49810 448 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 ANAPC15P60006 121 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 AKAP17AQ02040 695 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 MFSD10Q14728 455 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 NTRK3Q16288 839 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 CCDC12Q8WUD4 166 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 PHKBQ93100 1093 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 SENP7Q9BQF6 1050 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 RNF26Q9BY78 433 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 ANO3Q9BYT9 981 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 NOD1Q9Y239 953 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 UBIAD1Q9Y5Z9 338 aa12.52□□□□□ -0.41
PPP4R1-208ENST00000578178 IFNAR1P17181 557 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 ITGB5P18084 799 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 CLK2P49760 499 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 CCL23P55773 120 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 MTMR1Q13613 665 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 PKN1Q16512 942 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 PTGISQ16647 500 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 KIAA0753Q2KHM9 967 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 GDF6Q6KF10 455 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 CYFIP1Q7L576 1253 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 C7orf31Q8N865 590 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 GIMAP8Q8ND71 665 aaPredicted RBP12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 PGBD1Q96JS3 809 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.51□□□□□ -0.412e-13■■■■□ 22.1
PPP4R1-208ENST00000578178 IL23AQ9NPF7 189 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 PDRG1Q9NUG6 133 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 GTF2IRD1Q9UHL9 959 aa12.51□□□□□ -0.41
PPP4R1-208ENST00000578178 SCN5AQ14524 2016 aa12.5□□□□□ -0.41
PPP4R1-208ENST00000578178 PITPNM1O00562 1244 aa12.5□□□□□ -0.41
PPP4R1-208ENST00000578178 LGALS2P05162 132 aa12.5□□□□□ -0.41
PPP4R1-208ENST00000578178 KCNA2P16389 499 aa12.5□□□□□ -0.41
PPP4R1-208ENST00000578178 SREBF1P36956 1147 aa12.5□□□□□ -0.41
PPP4R1-208ENST00000578178 SMAD3P84022 425 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms