RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 IFIT1BQ5T764 474 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 MYSM1Q5VVJ2 828 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 PLEKHM2Q8IWE5 1019 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 HCN4Q9Y3Q4 1203 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 PALM3A6NDB9 673 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 EPOPA6NHQ4 379 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 NBNO60934 754 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 GOLGA8HP0CJ92 632 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 KIAA0753Q2KHM9 967 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 MICALL1Q8N3F8 863 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 CHMP4CQ96CF2 233 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 LMAN2LQ9H0V9 348 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 RIOX1Q9H6W3 641 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 ZSWIM5Q9P217 1185 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 FAM50BQ9Y247 325 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 RWDD3Q9Y3V2 267 aa13.05□□□□□ -0.32
SMARCE1-214ENST00000578112 CUL9Q8IWT3 2517 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 NEDD9Q14511 834 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 GRM4Q14833 912 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 SEC23AQ15436 765 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 FAM26DQ5JW98 314 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 RPAINQ86UA6 219 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 GIMAP8Q8ND71 665 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 KCNH6Q9H252 994 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 MICAL3Q7RTP6 2002 aa13.04□□□□□ -0.32
SMARCE1-214ENST00000578112 C17orf102A2RUQ5 167 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 LINC01553A4QN01 128 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 B4E1Z4 1266 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 POLR2MP0CAP2 368 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 PGM5Q15124 567 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 PLEKHG4Q58EX7 1191 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 SEPT8Q92599 483 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 KLRF2D3W0D1 207 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 DHX16O60231 1041 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 EIF2AK2P19525 551 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 TMEM31Q5JXX7 168 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 ZKSCAN3Q9BRR0 538 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 LNPKQ9C0E8 428 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 LAMA3Q16787 3333 aa13.03□□□□□ -0.32
SMARCE1-214ENST00000578112 TRIP12Q14669 1992 aaPredicted RBP13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 RSPH10B2B2RC85 870 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 PI4K2BG5E9Z4 385 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 CFBP00751 764 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 RSPH10BP0C881 870 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 TRDNQ13061 729 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 COL19A1Q14993 1142 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 ZNF618Q5T7W0 954 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 RUFY2Q8WXA3 655 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 TBC1D5Q92609 795 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 SPATA33Q96N06 139 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 C16orf70Q9BSU1 422 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 USP26Q9BXU7 913 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 MAD2L2Q9UI95 211 aa13.02□□□□□ -0.32
SMARCE1-214ENST00000578112 PNMA6FA0A0J9YX94 578 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 OPLAHO14841 1288 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 KCNQ1P51787 676 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 DEFB103AP81534 67 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 SART3Q15020 963 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 FBXO22Q8NEZ5 403 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 MRPL38Q96DV4 380 aaKnown RBP13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 SENP7Q9BQF6 1050 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 LZTS2Q9BRK4 669 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 ALG1Q9BT22 464 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 UBE2ZQ9H832 354 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 PRKAG3Q9UGI9 489 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 MYH7BA7E2Y1 1941 aa13.02□□□□□ -0.33
SMARCE1-214ENST00000578112 ERICH2A1L162 156 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 RFXAPO00287 272 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 FIBPO43427 364 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 ARHGEF15O94989 841 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 GGPS1O95749 300 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 RB1P06400 928 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 CWC27Q6UX04 472 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 METTL7BQ6UX53 244 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 SUGCTQ9HAC7 445 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 MLXIPQ9HAP2 919 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 ZNF215Q9UL58 517 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 U3KPZ7 1027 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 COL6A3P12111 3177 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 UBA1P22314 1058 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 TFF2Q03403 129 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 CDHR1Q96JP9 859 aa13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 INPP4AQ96PE3 977 aaPredicted RBP13.01□□□□□ -0.33
SMARCE1-214ENST00000578112 SPATA31C2B4DYI2 1134 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 PIK3CDO00329 1044 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 RGS20O76081 388 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 LRFN3Q9BTN0 628 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 H3BRB1 525 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 LGALS2P05162 132 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 ALADP13716 330 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
SMARCE1-214ENST00000578112 CHST3Q7LGC8 479 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 ATP6V0A1Q93050 837 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 TOP1MTQ969P6 601 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 TUT1Q9H6E5 874 aaKnown RBP13□□□□□ -0.33
SMARCE1-214ENST00000578112 CERS4Q9HA82 394 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 SQORQ9Y6N5 450 aa13□□□□□ -0.33
SMARCE1-214ENST00000578112 TET1Q8NFU7 2136 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms